STRINGSTRING
TPR TPR AAAS AAAS ENSVURP00010014023 ENSVURP00010014023 FIP1L1 FIP1L1 NUP54 NUP54 NUP160 NUP160 ENSVURP00010011897 ENSVURP00010011897 ALYREF ALYREF SHLD1 SHLD1 NDC1 NDC1 ENSVURP00010008501 ENSVURP00010008501 ENSVURP00010005806 ENSVURP00010005806 LOC114030964 LOC114030964 POM121C POM121C NUP155 NUP155 NUP153 NUP153 LOC114046165 LOC114046165 NUP43 NUP43 ENSVURP00010002296 ENSVURP00010002296 EIF4E1B EIF4E1B EIF4E EIF4E LOC114034806 LOC114034806 ENSVURP00010001477 ENSVURP00010001477 LOC114049493 LOC114049493 ENSVURP00010001009 ENSVURP00010001009 CPSF2 CPSF2 CPSF1 CPSF1 NUP88 NUP88 NUP50 NUP50 NUP107 NUP107 NUP37 NUP37 ENSVURP00010029191 ENSVURP00010029191 ENSVURP00010029179 ENSVURP00010029179 NUP98 NUP98 ENSVURP00010028070 ENSVURP00010028070 SLBP SLBP ENSVURP00010027441 ENSVURP00010027441 NUP58 NUP58 LOC114050635 LOC114050635 SEH1L SEH1L ENSVURP00010024728 ENSVURP00010024728 RAE1 RAE1 NUP35 NUP35 CPSF4 CPSF4 LOC114031469 LOC114031469 NUP93 NUP93 NCBP2 NCBP2 ENSVURP00010021935 ENSVURP00010021935 ENSVURP00010021913 ENSVURP00010021913 CPSF3 CPSF3 NUP62 NUP62 NUP205 NUP205 NUP210 NUP210 NUP188 NUP188 NUP214 NUP214 CPSF4L CPSF4L WDR33 WDR33 NCBP1 NCBP1 NUP85 NUP85
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TPRTranslocated promoter region, nuclear basket protein. (2318 aa)
AAASWD_REPEATS_REGION domain-containing protein. (543 aa)
ENSVURP00010014023Nsp1_C domain-containing protein. (193 aa)
FIP1L1Fip1 domain-containing protein. (583 aa)
NUP54Uncharacterized protein. (503 aa)
NUP160Uncharacterized protein. (1400 aa)
ENSVURP00010011897SLBP_RNA_bind domain-containing protein. (241 aa)
ALYREFAly/REF export factor. (294 aa)
SHLD1Shieldin complex subunit 1. (203 aa)
NDC1NDC1 transmembrane nucleoporin. (677 aa)
ENSVURP00010008501annotation not available (2949 aa)
ENSVURP00010005806Uncharacterized protein. (209 aa)
LOC114030964Uncharacterized protein. (1294 aa)
POM121CUncharacterized protein. (930 aa)
NUP155Uncharacterized protein. (1342 aa)
NUP153Uncharacterized protein. (1487 aa)
LOC114046165Uncharacterized protein. (2949 aa)
NUP43WD_REPEATS_REGION domain-containing protein. (380 aa)
ENSVURP00010002296C3H1-type domain-containing protein. (422 aa)
EIF4E1BEukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family. (272 aa)
EIF4EUncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
LOC114034806WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (321 aa)
ENSVURP00010001477WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (307 aa)
LOC114049493Uncharacterized protein. (1157 aa)
ENSVURP00010001009Uncharacterized protein. (1090 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CPSF1CPSF_A domain-containing protein. (1451 aa)
NUP88Uncharacterized protein. (754 aa)
NUP50RanBD1 domain-containing protein. (448 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (926 aa)
NUP37WD_REPEATS_REGION domain-containing protein. (326 aa)
ENSVURP00010029191BIG2 domain-containing protein. (658 aa)
ENSVURP00010029179annotation not available (296 aa)
NUP98Nucleoporin 98. (1797 aa)
ENSVURP00010028070annotation not available (1294 aa)
SLBPSLBP_RNA_bind domain-containing protein. (294 aa)
ENSVURP00010027441Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (98 aa)
NUP58Uncharacterized protein. (620 aa)
LOC114050635C3H1-type domain-containing protein. (431 aa)
SEH1LUncharacterized protein; Belongs to the WD repeat SEC13 family. (361 aa)
ENSVURP00010024728annotation not available (156 aa)
RAE1WD_REPEATS_REGION domain-containing protein. (368 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
CPSF4Uncharacterized protein. (269 aa)
LOC114031469Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (157 aa)
ENSVURP00010021935BIG2 domain-containing protein. (633 aa)
ENSVURP00010021913Uncharacterized protein. (296 aa)
CPSF3Uncharacterized protein. (674 aa)
NUP62Nsp1_C domain-containing protein. (636 aa)
NUP205Uncharacterized protein. (2017 aa)
NUP210BIG2 domain-containing protein. (1957 aa)
NUP188Uncharacterized protein. (1747 aa)
NUP214Nup214_FG domain-containing protein. (2110 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (165 aa)
WDR33WD repeat domain 33. (1339 aa)
NCBP1MIF4G domain-containing protein. (794 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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