STRINGSTRING
ENSVURP00010002181 ENSVURP00010002181 ENSVURP00010002106 ENSVURP00010002106 PPP2R2A PPP2R2A ENSVURP00010001802 ENSVURP00010001802 ENSVURP00010001787 ENSVURP00010001787 ENSVURP00010001779 ENSVURP00010001779 TMEM223 TMEM223 NXF1 NXF1 ENSVURP00010000843 ENSVURP00010000843 LOC114043133 LOC114043133 ENSVURP00010000307 ENSVURP00010000307 DDX19B DDX19B ENSVURP00010000265 ENSVURP00010000265 CPSF2 CPSF2 ENSVURP00010000101 ENSVURP00010000101 CUNH3orf67 CUNH3orf67 DCLRE1A DCLRE1A CFAP20 CFAP20 CPSF1 CPSF1 PPP1CA PPP1CA ENSVURP00010032215 ENSVURP00010032215 ENSVURP00010032211 ENSVURP00010032211 DDX39A DDX39A NEDD1 NEDD1 CPSF6 CPSF6 TARDBP TARDBP PPP1CC PPP1CC PYM1 PYM1 DUSP11 DUSP11 ENSVURP00010030956 ENSVURP00010030956 SSU72 SSU72 TMEM240 TMEM240 INTS11 INTS11 SRRM1 SRRM1 ENSVURP00010029669 ENSVURP00010029669 ENSVURP00010029292 ENSVURP00010029292 PPP2R2C PPP2R2C DDX25 DDX25 ENSVURP00010028669 ENSVURP00010028669 ENSVURP00010028070 ENSVURP00010028070 ENSVURP00010028050 ENSVURP00010028050 SAP18 SAP18 PELO PELO ENSVURP00010027581 ENSVURP00010027581 ENSVURP00010027390 ENSVURP00010027390 ENSVURP00010027182 ENSVURP00010027182 ENSVURP00010027177 ENSVURP00010027177 PABPN1L PABPN1L PABPN1 PABPN1 ACIN1 ACIN1 PPP2R3C PPP2R3C PPP1CB PPP1CB PPP4R4 PPP4R4 PPP2R1B PPP2R1B ENSVURP00010025562 ENSVURP00010025562 RNMT RNMT ENSVURP00010024918 ENSVURP00010024918 ENSVURP00010024839 ENSVURP00010024839 ENSVURP00010024728 ENSVURP00010024728 LOC114053346 LOC114053346 ENSVURP00010024605 ENSVURP00010024605 ENSVURP00010024562 ENSVURP00010024562 ENSVURP00010024548 ENSVURP00010024548 LOC114024774 LOC114024774 CZIB CZIB CSTF1 CSTF1 LOC114034866 LOC114034866 PPP2R5E PPP2R5E CPSF4 CPSF4 LOC114031469 LOC114031469 NUDT21 NUDT21 ENSVURP00010023254 ENSVURP00010023254 LOC114031518 LOC114031518 FUS FUS NCBP2 NCBP2 RBBP6 RBBP6 TWF2 TWF2 WDR82 WDR82 BOLL BOLL CIRBP CIRBP DAZAP1 DAZAP1 ENSVURP00010021629 ENSVURP00010021629 ENSVURP00010021215 ENSVURP00010021215 ENSVURP00010020944 ENSVURP00010020944 ZC3H6 ZC3H6 CPSF3 CPSF3 PPP2R3B PPP2R3B WDR90 WDR90 INTS9 INTS9 UPF1 UPF1 UPF3B UPF3B LOC114053779 LOC114053779 LOC114054225 LOC114054225 ENSVURP00010019348 ENSVURP00010019348 GLE1 GLE1 SMG5 SMG5 MKRN1 MKRN1 UPF2 UPF2 ENSVURP00010018411 ENSVURP00010018411 PIH1D3 PIH1D3 PAPOLG PAPOLG MSI2 MSI2 ENSVURP00010017630 ENSVURP00010017630 LOC114031856 LOC114031856 MKRN2 MKRN2 ENSVURP00010017072 ENSVURP00010017072 ENSVURP00010017067 ENSVURP00010017067 ENSVURP00010016667 ENSVURP00010016667 CPSF4L CPSF4L YTHDC1 YTHDC1 WDR33 WDR33 ENSVURP00010015799 ENSVURP00010015799 PPP2CB PPP2CB NCBP1 NCBP1 PPP2R5A PPP2R5A ENSVURP00010014890 ENSVURP00010014890 EIF2A EIF2A PPP2R2D PPP2R2D FIP1L1 FIP1L1 SMG7 SMG7 ENSVURP00010013026 ENSVURP00010013026 EIF4A3 EIF4A3 FNBP4 FNBP4 PNN PNN RNPS1 RNPS1 ETF1 ETF1 ENSVURP00010011679 ENSVURP00010011679 WDR77 WDR77 PPP2R1A PPP2R1A ALYREF ALYREF PPP2R2B PPP2R2B PPP2R3A PPP2R3A POLDIP3 POLDIP3 SMG6 SMG6 DCLRE1B DCLRE1B PPP2CA PPP2CA PABPC1 PABPC1 MSI1 MSI1 PCF11 PCF11 ENSVURP00010008441 ENSVURP00010008441 ENSVURP00010008342 ENSVURP00010008342 ENSVURP00010008337 ENSVURP00010008337 PPP2R5D PPP2R5D RNGTT RNGTT ENSVURP00010007820 ENSVURP00010007820 CLP1 CLP1 LOC114052505 LOC114052505 ENSVURP00010007123 ENSVURP00010007123 ENSVURP00010007104 ENSVURP00010007104 MSL1 MSL1 CASC3 CASC3 ENSVURP00010006052 ENSVURP00010006052 ENSVURP00010005806 ENSVURP00010005806 RNF141 RNF141 ENSVURP00010005481 ENSVURP00010005481 LOC114030964 LOC114030964 HBS1L HBS1L PPP2R5C PPP2R5C ENSVURP00010005221 ENSVURP00010005221 TWF1 TWF1 CSTF2 CSTF2 CPSF7 CPSF7 TMEM258 TMEM258 PPP2R5B PPP2R5B PAPOLA PAPOLA ENSVURP00010002935 ENSVURP00010002935 ENSVURP00010002847 ENSVURP00010002847 PABPC4 PABPC4 ENSVURP00010002558 ENSVURP00010002558 DDX39B DDX39B ENSVURP00010002237 ENSVURP00010002237
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSVURP00010002181Uncharacterized protein. (330 aa)
ENSVURP00010002106Uncharacterized protein. (544 aa)
PPP2R2ASerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (446 aa)
ENSVURP00010001802annotation not available (174 aa)
ENSVURP00010001787Uncharacterized protein. (171 aa)
ENSVURP00010001779Smg4_UPF3 domain-containing protein. (133 aa)
TMEM223Uncharacterized protein. (206 aa)
NXF1Uncharacterized protein. (624 aa)
ENSVURP00010000843Uncharacterized protein. (58 aa)
LOC114043133RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
ENSVURP00010000307Uncharacterized protein. (271 aa)
DDX19BUncharacterized protein. (506 aa)
ENSVURP00010000265Uncharacterized protein. (53 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
ENSVURP00010000101C2H2-type domain-containing protein. (216 aa)
CUNH3orf67DUF667 domain-containing protein. (813 aa)
DCLRE1ADRMBL domain-containing protein. (1040 aa)
CFAP20DUF667 domain-containing protein. (193 aa)
CPSF1CPSF_A domain-containing protein. (1451 aa)
PPP1CASerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)
ENSVURP00010032215MPN domain-containing protein. (204 aa)
ENSVURP00010032211Serine/threonine-protein phosphatase. (309 aa)
DDX39AUncharacterized protein. (427 aa)
NEDD1WD_REPEATS_REGION domain-containing protein. (659 aa)
CPSF6RRM domain-containing protein. (588 aa)
TARDBPUncharacterized protein. (414 aa)
PPP1CCSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (337 aa)
PYM1Mago-bind domain-containing protein. (247 aa)
DUSP11TYR_PHOSPHATASE_2 domain-containing protein. (350 aa)
ENSVURP00010030956Uncharacterized protein. (468 aa)
SSU72Uncharacterized protein. (194 aa)
TMEM240Transmembrane protein 240. (173 aa)
INTS11Uncharacterized protein. (600 aa)
SRRM1PWI domain-containing protein. (907 aa)
ENSVURP00010029669Uncharacterized protein. (1221 aa)
ENSVURP00010029292annotation not available (956 aa)
PPP2R2CSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (447 aa)
DDX25Uncharacterized protein. (482 aa)
ENSVURP00010028669NTF2 domain-containing protein. (139 aa)
ENSVURP00010028070annotation not available (1294 aa)
ENSVURP00010028050Uncharacterized protein. (127 aa)
SAP18Uncharacterized protein. (172 aa)
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
ENSVURP00010027581PABC domain-containing protein. (193 aa)
ENSVURP00010027390annotation not available (3659 aa)
ENSVURP00010027182annotation not available (334 aa)
ENSVURP00010027177Uncharacterized protein. (311 aa)
PABPN1LRRM domain-containing protein. (301 aa)
PABPN1RRM domain-containing protein. (306 aa)
ACIN1SAP domain-containing protein. (1279 aa)
PPP2R3CEF-hand_13 domain-containing protein. (449 aa)
PPP1CBSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (341 aa)
PPP4R4Uncharacterized protein. (871 aa)
PPP2R1BUncharacterized protein. (662 aa)
ENSVURP00010025562annotation not available (216 aa)
RNMTmRNA cap guanine-N7 methyltransferase. (477 aa)
ENSVURP00010024918Tr-type G domain-containing protein. (634 aa)
ENSVURP00010024839Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (608 aa)
ENSVURP00010024728annotation not available (156 aa)
LOC114053346Uncharacterized protein. (358 aa)
ENSVURP00010024605annotation not available (582 aa)
ENSVURP00010024562annotation not available (653 aa)
ENSVURP00010024548Uncharacterized protein. (582 aa)
LOC114024774Uncharacterized protein. (147 aa)
CZIBCXXC motif containing zinc binding protein. (186 aa)
CSTF1WD_REPEATS_REGION domain-containing protein. (431 aa)
LOC114034866WRNPLPNID domain-containing protein. (943 aa)
PPP2R5ESerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (467 aa)
CPSF4Uncharacterized protein. (269 aa)
LOC114031469Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
ENSVURP00010023254TPR_REGION domain-containing protein. (330 aa)
LOC114031518Uncharacterized protein. (653 aa)
FUSUncharacterized protein. (530 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (157 aa)
RBBP6Uncharacterized protein. (1843 aa)
TWF2Uncharacterized protein. (349 aa)
WDR82WD_REPEATS_REGION domain-containing protein. (318 aa)
BOLLBoule homolog, RNA binding protein. (310 aa)
CIRBPRRM domain-containing protein. (172 aa)
DAZAP1Uncharacterized protein. (407 aa)
ENSVURP00010021629Uncharacterized protein. (194 aa)
ENSVURP00010021215Suf domain-containing protein. (518 aa)
ENSVURP00010020944NTF2 domain-containing protein. (143 aa)
ZC3H6Zinc finger CCCH-type containing 6. (1068 aa)
CPSF3Uncharacterized protein. (674 aa)
PPP2R3BEF-hand domain-containing protein. (580 aa)
WDR90Uncharacterized protein. (1857 aa)
INTS9Beta-Casp domain-containing protein. (658 aa)
UPF1UPF1 RNA helicase and ATPase. (1129 aa)
UPF3BSmg4_UPF3 domain-containing protein. (568 aa)
LOC114053779MPN domain-containing protein. (334 aa)
LOC114054225Uncharacterized protein. (296 aa)
ENSVURP00010019348Uncharacterized protein. (196 aa)
GLE1GLE1 RNA export mediator. (693 aa)
SMG5PINc domain-containing protein. (1017 aa)
MKRN1Uncharacterized protein. (478 aa)
UPF2Uncharacterized protein. (1271 aa)
ENSVURP00010018411NTF2 domain-containing protein. (138 aa)
PIH1D3PIH1_CS domain-containing protein. (195 aa)
PAPOLGPoly(A) polymerase gamma. (709 aa)
MSI2Uncharacterized protein. (346 aa)
ENSVURP00010017630WD_REPEATS_REGION domain-containing protein. (314 aa)
LOC114031856WRNPLPNID domain-containing protein. (956 aa)
MKRN2Uncharacterized protein. (453 aa)
ENSVURP00010017072RRM domain-containing protein. (93 aa)
ENSVURP00010017067Suf domain-containing protein. (710 aa)
ENSVURP00010016667Uncharacterized protein. (439 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (165 aa)
YTHDC1YTH domain-containing protein. (709 aa)
WDR33WD repeat domain 33. (1339 aa)
ENSVURP00010015799Uncharacterized protein. (195 aa)
PPP2CBSerine/threonine-protein phosphatase. (309 aa)
NCBP1MIF4G domain-containing protein. (794 aa)
PPP2R5ASerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (496 aa)
ENSVURP00010014890Uncharacterized protein. (1235 aa)
EIF2AEukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (586 aa)
PPP2R2DSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (443 aa)
FIP1L1Fip1 domain-containing protein. (583 aa)
SMG7SMG7 nonsense mediated mRNA decay factor. (1083 aa)
ENSVURP00010013026Uncharacterized protein. (119 aa)
EIF4A3Uncharacterized protein; Belongs to the DEAD box helicase family. (411 aa)
FNBP4Uncharacterized protein. (1047 aa)
PNNUncharacterized protein. (716 aa)
RNPS1RRM domain-containing protein. (305 aa)
ETF1eRF1_1 domain-containing protein. (437 aa)
ENSVURP00010011679Tr-type G domain-containing protein. (500 aa)
WDR77WD_REPEATS_REGION domain-containing protein. (360 aa)
PPP2R1AUncharacterized protein. (589 aa)
ALYREFAly/REF export factor. (294 aa)
PPP2R2BSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (443 aa)
PPP2R3AEF-hand domain-containing protein. (1155 aa)
POLDIP3RRM domain-containing protein. (418 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1407 aa)
DCLRE1BLactamase_B domain-containing protein. (535 aa)
PPP2CASerine/threonine-protein phosphatase. (309 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (633 aa)
MSI1Uncharacterized protein. (362 aa)
PCF11CID domain-containing protein. (1692 aa)
ENSVURP00010008441Uncharacterized protein. (118 aa)
ENSVURP00010008342annotation not available (171 aa)
ENSVURP00010008337Smg4_UPF3 domain-containing protein. (148 aa)
PPP2R5DSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (602 aa)
RNGTTPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (584 aa)
ENSVURP00010007820WD_REPEATS_REGION domain-containing protein. (64 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (426 aa)
LOC114052505Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3659 aa)
ENSVURP00010007123DUF2439 domain-containing protein. (492 aa)
ENSVURP00010007104AAA_12 domain-containing protein. (242 aa)
MSL1PEHE domain-containing protein. (609 aa)
CASC3Btz domain-containing protein. (759 aa)
ENSVURP00010006052Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (633 aa)
ENSVURP00010005806Uncharacterized protein. (209 aa)
RNF141RING-type domain-containing protein. (231 aa)
ENSVURP00010005481Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (620 aa)
LOC114030964Uncharacterized protein. (1294 aa)
HBS1LTr-type G domain-containing protein. (684 aa)
PPP2R5CSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (565 aa)
ENSVURP00010005221Uncharacterized protein. (148 aa)
TWF1Uncharacterized protein. (366 aa)
CSTF2RRM domain-containing protein. (564 aa)
CPSF7RRM domain-containing protein. (486 aa)
TMEM258Transmembrane protein 258. (74 aa)
PPP2R5BSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (494 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (738 aa)
ENSVURP00010002935TPR_REGION domain-containing protein. (445 aa)
ENSVURP00010002847RRM domain-containing protein. (818 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (629 aa)
ENSVURP00010002558WD_REPEATS_REGION domain-containing protein. (78 aa)
DDX39BUncharacterized protein. (428 aa)
ENSVURP00010002237PABC domain-containing protein. (182 aa)
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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