STRINGSTRING
AOI85539.1 AOI85539.1 AOI85935.1 AOI85935.1 braC_2 braC_2 urtA urtA AOI81055.1 AOI81055.1 AOI81053.1 AOI81053.1 AOI81971.1 AOI81971.1 AOI83157.1 AOI83157.1 AOI84415.1 AOI84415.1 braC_7 braC_7 braC_11 braC_11 livJ livJ AmiC AmiC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOI85539.1Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
AOI85935.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
braC_2Branched chain amino acid ABC transporter substrate-binding protein; With LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
urtABranched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
AOI81055.1Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
AOI81053.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
AOI81971.1Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
AOI83157.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
AOI84415.1Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
braC_7Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
braC_11Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
livJABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
AmiCAmino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, Burkholderia sp. Bp7081, Burkholderia sp. Bp7091, Burkholderia sp. Bp7098, Burkholderia sp. Bp7108, Burkholderia sp. Bp7432, Burkholderia sp. LK29, Burkholderia sp. NCIM 5465, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: medium (56%) [HD]