STRINGSTRING
ABF62785.1 ABF62785.1 ABF62807.1 ABF62807.1 ABF62829.1 ABF62829.1 ABF62830.1 ABF62830.1 ABF63269.1 ABF63269.1 ABF63370.1 ABF63370.1 ABF63403.1 ABF63403.1 ABF63580.1 ABF63580.1 ABF63839.1 ABF63839.1 ABF64086.1 ABF64086.1 yhdH yhdH ABF64307.1 ABF64307.1 ABF64598.1 ABF64598.1 ABF64602.1 ABF64602.1 ABF64610.1 ABF64610.1 ABF64735.1 ABF64735.1 ABF65378.1 ABF65378.1 ABF65387.1 ABF65387.1 ABF65388.1 ABF65388.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABF62785.1Gamma-butyrobetaine2-oxoglutarate dioxygenase. (402 aa)
ABF62807.1Aldehyde dehydrogenase. (480 aa)
ABF62829.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (780 aa)
ABF62830.1Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (351 aa)
ABF63269.1Alcohol dehydrogenase GroES-like protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (371 aa)
ABF63370.1methylmalonyl-CoA epimerase. (134 aa)
ABF63403.1LAO/AO transport system ATPase. (333 aa)
ABF63580.1Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (494 aa)
ABF63839.1Methylmalonate-semialdehyde dehydrogenase (acylating). (499 aa)
ABF64086.13-hydroxyisobutyrate dehydrogenase. (290 aa)
yhdHHypothetical protein. (331 aa)
ABF64307.1AMP-dependent synthetase and ligase. (630 aa)
ABF64598.1methylmalonyl-CoA mutase. (661 aa)
ABF64602.1Carbamoyl-phosphate synthase L chain ATP-binding. (676 aa)
ABF64610.1Propionyl-CoA carboxylase. (510 aa)
ABF64735.16-phosphogluconate dehydrogenase NAD-binding. (325 aa)
ABF65378.1Alkane 1-monooxygenase. (380 aa)
ABF65387.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (502 aa)
ABF65388.1Saccharopine dehydrogenase. (373 aa)
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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