STRINGSTRING
ABF62785.1 ABF62785.1 ABF62807.1 ABF62807.1 ABF62829.1 ABF62829.1 ABF62830.1 ABF62830.1 ABF63269.1 ABF63269.1 ABF63580.1 ABF63580.1 ABF63839.1 ABF63839.1 ABF64086.1 ABF64086.1 yhdH yhdH ABF64307.1 ABF64307.1 ABF64735.1 ABF64735.1 ABF65378.1 ABF65378.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABF62785.1Gamma-butyrobetaine2-oxoglutarate dioxygenase. (402 aa)
ABF62807.1Aldehyde dehydrogenase. (480 aa)
ABF62829.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (780 aa)
ABF62830.1Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (351 aa)
ABF63269.1Alcohol dehydrogenase GroES-like protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (371 aa)
ABF63580.1Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (494 aa)
ABF63839.1Methylmalonate-semialdehyde dehydrogenase (acylating). (499 aa)
ABF64086.13-hydroxyisobutyrate dehydrogenase. (290 aa)
yhdHHypothetical protein. (331 aa)
ABF64307.1AMP-dependent synthetase and ligase. (630 aa)
ABF64735.16-phosphogluconate dehydrogenase NAD-binding. (325 aa)
ABF65378.1Alkane 1-monooxygenase. (380 aa)
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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