STRINGSTRING
ABF63609.1 ABF63609.1 ABF63610.1 ABF63610.1 ABF63611.1 ABF63611.1 ABF63612.1 ABF63612.1 ABF63613.1 ABF63613.1 ABF64889.1 ABF64889.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABF63609.1Two component transcriptional regulator, LuxR family. (233 aa)
ABF63610.1Periplasmic sensor signal transduction histidine kinase. (474 aa)
ABF63611.1Twin-arginine translocation pathway signal; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (361 aa)
ABF63612.1TRAP-type mannitol/chloroaromatic compound transport system small permease component-like protein. (315 aa)
ABF63613.1TRAP C4-dicarboxylate transport system permease DctM subunit. (784 aa)
ABF64889.1Hypothetical protein. (163 aa)
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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