(34 nodes) Protein histidine kinase activity, and Cell pole network (Ruegeria sp. TM1040)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABF62845.1	PAS/PAC sensor hybrid histidine kinase. (634 aa)
	ABF62869.1	Response regulator receiver protein. (128 aa)
	ABF62870.1	Histidine kinase. (391 aa)
	hik	Histidine kinase. (476 aa)
	ABF63041.1	Diguanylate cyclase/phosphodiesterase. (499 aa)
	arcB	Multi-sensor hybrid histidine kinase. (827 aa)
	cheR3	MCP methyltransferase, CheR-type. (837 aa)
	mcpK	Methyl-accepting chemotaxis sensory transducer. (589 aa)
	ABF63562.1	Response regulator receiver protein. (141 aa)
	aphA	PAS/PAC sensor signal transduction histidine kinase. (394 aa)
	hik-2	PAS/PAC sensor hybrid histidine kinase. (823 aa)
	mcpM	Methyl-accepting chemotaxis sensory transducer. (608 aa)
	cheR4	Signal transduction histidine kinase with CheB and CheR activity. (1248 aa)
	ABF63762.1	Response regulator receiver protein. (127 aa)
	ABF63763.1	Histidine kinase. (781 aa)
	ABF63764.1	Response regulator receiver protein. (131 aa)
	ABF63768.1	Diguanylate cyclase. (313 aa)
	ABF63939.1	Hypothetical protein. (198 aa)
	ABF63948.1	Response regulator receiver protein. (153 aa)
	ABF63949.1	Multi-sensor signal transduction histidine kinase. (769 aa)
	cckA	Multi-sensor hybrid histidine kinase. (769 aa)
	ctrA	Two component transcriptional regulator, winged helix family. (239 aa)
	ABF64212.1	Periplasmic sensor signal transduction histidine kinase. (442 aa)
	mcpQ	Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. (462 aa)
	ABF64587.1	GAF sensor hybrid histidine kinase. (579 aa)
	ABF64727.1	Putative PAS/PAC sensor protein. (305 aa)
	ABF64729.1	Periplasmic sensor signal transduction histidine kinase. (592 aa)
	ABF64730.1	Response regulator receiver protein. (140 aa)
	ABF64742.1	Histidine kinase. (354 aa)
	cheR5	MCP methyltransferase, CheR-type. (824 aa)
	ABF64961.1	Diguanylate cyclase/phosphodiesterase. (582 aa)
	ABF65478.1	Multi-sensor hybrid histidine kinase. (1096 aa)
	pleC	Histidine kinase. (761 aa)
	ABF65656.1	Two component transcriptional regulator, winged helix family. (234 aa)

Your Current Organism:

Ruegeria sp. TM1040

NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABF62845.1	ABF62869.1	TM1040_0112	TM1040_0136	PAS/PAC sensor hybrid histidine kinase.	Response regulator receiver protein.	0.904
ABF62845.1	ABF62870.1	TM1040_0112	TM1040_0137	PAS/PAC sensor hybrid histidine kinase.	Histidine kinase.	0.982
ABF62845.1	ABF63041.1	TM1040_0112	TM1040_0308	PAS/PAC sensor hybrid histidine kinase.	Diguanylate cyclase/phosphodiesterase.	0.665
ABF62845.1	ABF63763.1	TM1040_0112	TM1040_1030	PAS/PAC sensor hybrid histidine kinase.	Histidine kinase.	0.812
ABF62845.1	ABF63764.1	TM1040_0112	TM1040_1031	PAS/PAC sensor hybrid histidine kinase.	Response regulator receiver protein.	0.986
ABF62845.1	ABF63768.1	TM1040_0112	TM1040_1035	PAS/PAC sensor hybrid histidine kinase.	Diguanylate cyclase.	0.898
ABF62845.1	ABF63949.1	TM1040_0112	TM1040_1216	PAS/PAC sensor hybrid histidine kinase.	Multi-sensor signal transduction histidine kinase.	0.956
ABF62845.1	ABF64587.1	TM1040_0112	TM1040_1854	PAS/PAC sensor hybrid histidine kinase.	GAF sensor hybrid histidine kinase.	0.963
ABF62845.1	ABF64727.1	TM1040_0112	TM1040_1995	PAS/PAC sensor hybrid histidine kinase.	Putative PAS/PAC sensor protein.	0.813
ABF62845.1	ABF64729.1	TM1040_0112	TM1040_1997	PAS/PAC sensor hybrid histidine kinase.	Periplasmic sensor signal transduction histidine kinase.	0.791
ABF62845.1	ABF64961.1	TM1040_0112	TM1040_2229	PAS/PAC sensor hybrid histidine kinase.	Diguanylate cyclase/phosphodiesterase.	0.695
ABF62845.1	ABF65478.1	TM1040_0112	TM1040_2746	PAS/PAC sensor hybrid histidine kinase.	Multi-sensor hybrid histidine kinase.	0.930
ABF62845.1	ABF65656.1	TM1040_0112	TM1040_2924	PAS/PAC sensor hybrid histidine kinase.	Two component transcriptional regulator, winged helix family.	0.533
ABF62845.1	aphA	TM1040_0112	TM1040_0830	PAS/PAC sensor hybrid histidine kinase.	PAS/PAC sensor signal transduction histidine kinase.	0.956
ABF62845.1	arcB	TM1040_0112	TM1040_0342	PAS/PAC sensor hybrid histidine kinase.	Multi-sensor hybrid histidine kinase.	0.968
ABF62845.1	cckA	TM1040_0112	TM1040_1228	PAS/PAC sensor hybrid histidine kinase.	Multi-sensor hybrid histidine kinase.	0.565
ABF62845.1	cheR3	TM1040_0112	TM1040_0460	PAS/PAC sensor hybrid histidine kinase.	MCP methyltransferase, CheR-type.	0.974
ABF62845.1	cheR4	TM1040_0112	TM1040_1028	PAS/PAC sensor hybrid histidine kinase.	Signal transduction histidine kinase with CheB and CheR activity.	0.994
ABF62845.1	cheR5	TM1040_0112	TM1040_2227	PAS/PAC sensor hybrid histidine kinase.	MCP methyltransferase, CheR-type.	0.974
ABF62845.1	ctrA	TM1040_0112	TM1040_1399	PAS/PAC sensor hybrid histidine kinase.	Two component transcriptional regulator, winged helix family.	0.533