STRINGSTRING
hik-2 hik-2 ABF65171.1 ABF65171.1 ABF65135.1 ABF65135.1 ABF65118.1 ABF65118.1 prmA prmA cobB cobB rimO rimO nrdI nrdI cheR3 cheR3 ABF63139.1 ABF63139.1 arcB arcB ABF63049.1 ABF63049.1 ABF63041.1 ABF63041.1 ABF62994.1 ABF62994.1 ABF63536.1 ABF63536.1 aphA aphA ABF63610.1 ABF63610.1 bpt bpt selO selO prmC prmC ABF65060.1 ABF65060.1 ABF64961.1 ABF64961.1 ABF63408.1 ABF63408.1 ABF65759.1 ABF65759.1 regB regB ABF65526.1 ABF65526.1 pleC pleC ABF65478.1 ABF65478.1 ABF65466.1 ABF65466.1 acpS acpS hemC hemC map map ABF62845.1 ABF62845.1 hik hik cheR5 cheR5 ABF64948.1 ABF64948.1 ABF64888.1 ABF64888.1 ABF64742.1 ABF64742.1 ABF64729.1 ABF64729.1 ABF64724.1 ABF64724.1 ABF64635.1 ABF64635.1 ABF64587.1 ABF64587.1 ABF64548.1 ABF64548.1 pcm pcm ABF64507.1 ABF64507.1 ABF64505.1 ABF64505.1 ABF64403.1 ABF64403.1 ABF64357.1 ABF64357.1 ABF64313.1 ABF64313.1 ABF64240.1 ABF64240.1 ABF64212.1 ABF64212.1 ABF64195.1 ABF64195.1 lipA lipA ABF64095.1 ABF64095.1 ABF64093.1 ABF64093.1 ABF63996.1 ABF63996.1 cckA cckA ABF63949.1 ABF63949.1 ABF63939.1 ABF63939.1 ccmE ccmE ABF63837.1 ABF63837.1 ABF63819.1 ABF63819.1 ABF63818.1 ABF63818.1 gp34 gp34 ABF63764.1 ABF63764.1 cheR4 cheR4 ABF65172.1 ABF65172.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hik-2PAS/PAC sensor hybrid histidine kinase. (823 aa)
ABF65171.1Hpr(Ser) kinase/phosphatase. (162 aa)
ABF65135.1Phosphopantetheinyl transferase PptA; putative; Belongs to the P-Pant transferase superfamily. (236 aa)
ABF65118.1GCN5-related N-acetyltransferase. (154 aa)
prmALSU ribosomal protein L11P methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (289 aa)
cobBSilent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily. (232 aa)
rimOHypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (467 aa)
nrdInrdI protein; Probably involved in ribonucleotide reductase function. (140 aa)
cheR3MCP methyltransferase, CheR-type. (837 aa)
ABF63139.1Periplasmic sensor signal transduction histidine kinase. (658 aa)
arcBMulti-sensor hybrid histidine kinase. (827 aa)
ABF63049.1Periplasmic sensor signal transduction histidine kinase. (461 aa)
ABF63041.1Diguanylate cyclase/phosphodiesterase. (499 aa)
ABF62994.1Hypothetical protein. (209 aa)
ABF63536.1Phage-related conserved hypothetical protein. (349 aa)
aphAPAS/PAC sensor signal transduction histidine kinase. (394 aa)
ABF63610.1Periplasmic sensor signal transduction histidine kinase. (474 aa)
bptArginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (274 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (472 aa)
prmCModification methylase HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (278 aa)
ABF65060.1GCN5-related N-acetyltransferase. (196 aa)
ABF64961.1Diguanylate cyclase/phosphodiesterase. (582 aa)
ABF63408.1Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (149 aa)
ABF65759.12-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. (508 aa)
regBTwo component sensor kinase. (465 aa)
ABF65526.1CoA-binding. (679 aa)
pleCHistidine kinase. (761 aa)
ABF65478.1Multi-sensor hybrid histidine kinase. (1096 aa)
ABF65466.1Periplasmic sensor signal transduction histidine kinase. (461 aa)
acpSHolo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (142 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (318 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (271 aa)
ABF62845.1PAS/PAC sensor hybrid histidine kinase. (634 aa)
hikHistidine kinase. (476 aa)
cheR5MCP methyltransferase, CheR-type. (824 aa)
ABF64948.1Precorrin-6y C515-methyltransferase subunit CbiE. (341 aa)
ABF64888.1Diguanylate cyclase/phosphodiesterase. (904 aa)
ABF64742.1Histidine kinase. (354 aa)
ABF64729.1Periplasmic sensor signal transduction histidine kinase. (592 aa)
ABF64724.1protein-L-isoaspartate(D-aspartate) O-methyltransferase. (217 aa)
ABF64635.1Hypothetical protein. (279 aa)
ABF64587.1GAF sensor hybrid histidine kinase. (579 aa)
ABF64548.1Periplasmic sensor signal transduction histidine kinase. (583 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (215 aa)
ABF64507.1Glycosyl transferase group 2 family protein. (377 aa)
ABF64505.1Hypothetical protein. (219 aa)
ABF64403.1Portal protein (GP3). (407 aa)
ABF64357.1Portal protein (GP3). (428 aa)
ABF64313.1Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (230 aa)
ABF64240.1Periplasmic sensor signal transduction histidine kinase. (896 aa)
ABF64212.1Periplasmic sensor signal transduction histidine kinase. (442 aa)
ABF64195.1Periplasmic sensor signal transduction histidine kinase. (600 aa)
lipALipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (330 aa)
ABF64095.1Signal transduction histidine kinase, nitrogen specific, NtrB. (362 aa)
ABF64093.1Multi-sensor signal transduction histidine kinase. (759 aa)
ABF63996.1Histidine kinase. (346 aa)
cckAMulti-sensor hybrid histidine kinase. (769 aa)
ABF63949.1Multi-sensor signal transduction histidine kinase. (769 aa)
ABF63939.1Hypothetical protein. (198 aa)
ccmECcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (147 aa)
ABF63837.1TPR repeat. (616 aa)
ABF63819.1Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (182 aa)
ABF63818.1Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (168 aa)
gp34Portal protein (GP3). (401 aa)
ABF63764.1Response regulator receiver protein. (131 aa)
cheR4Signal transduction histidine kinase with CheB and CheR activity. (1248 aa)
ABF65172.1Periplasmic sensor signal transduction histidine kinase. (577 aa)
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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