STRINGSTRING
ABF62763.1 ABF62763.1 ABF62807.1 ABF62807.1 ABF62829.1 ABF62829.1 ABF63096.1 ABF63096.1 pgi pgi ABF63150.1 ABF63150.1 ABF63258.1 ABF63258.1 ABF63269.1 ABF63269.1 ABF63385.1 ABF63385.1 ABF63468.1 ABF63468.1 tpiA tpiA ABF63580.1 ABF63580.1 eno eno ABF63810.1 ABF63810.1 ABF63811.1 ABF63811.1 pdhA pdhA pgk pgk ABF63829.1 ABF63829.1 ABF63844.1 ABF63844.1 ABF63926.1 ABF63926.1 acsA acsA ABF64708.1 ABF64708.1 ABF64897.1 ABF64897.1 ABF65041.1 ABF65041.1 ABF65126.1 ABF65126.1 pckA pckA ABF65248.1 ABF65248.1 ABF65387.1 ABF65387.1 Transketolase Transketolase gpmI gpmI ABF65507.1 ABF65507.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABF62763.1Aldose 1-epimerase. (335 aa)
ABF62807.1Aldehyde dehydrogenase. (480 aa)
ABF62829.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (780 aa)
ABF63096.1Glucokinase; Belongs to the bacterial glucokinase family. (320 aa)
pgiGlucose-6-phosphate isomerase. (536 aa)
ABF63150.1Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (334 aa)
ABF63258.1Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (332 aa)
ABF63269.1Alcohol dehydrogenase GroES-like protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (371 aa)
ABF63385.1Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I. (498 aa)
ABF63468.1AMP-dependent synthetase and ligase. (526 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (246 aa)
ABF63580.1Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (494 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (425 aa)
ABF63810.1Dihydrolipoamide acetyltransferase long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (446 aa)
ABF63811.1Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (458 aa)
pdhAPyruvate dehydrogenase (lipoamide); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (337 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (396 aa)
ABF63829.1Dihydrolipoamide dehydrogenase. (464 aa)
ABF63844.1Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (333 aa)
ABF63926.1Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase. (278 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (652 aa)
ABF64708.1Fructose-bisphosphate aldolase. (300 aa)
ABF64897.1Fructose-16-bisphosphatase class II. (327 aa)
ABF65041.1Pyruvate phosphate dikinase. (854 aa)
ABF65126.1Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (329 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (532 aa)
ABF65248.1Pyruvate kinase; Belongs to the pyruvate kinase family. (481 aa)
ABF65387.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (502 aa)
TransketolaseTransketolase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (794 aa)
gpmIPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (506 aa)
ABF65507.1Dihydrolipoamide dehydrogenase. (452 aa)
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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