STRINGSTRING
Tbd_0153 Tbd_0153 Tbd_2288 Tbd_2288 phnN phnN Tbd_2290 Tbd_2290 Tbd_2291 Tbd_2291 Tbd_2292 Tbd_2292 Tbd_2293 Tbd_2293 Tbd_2294 Tbd_2294 Tbd_2295 Tbd_2295 Tbd_2296 Tbd_2296 Tbd_2297 Tbd_2297 Tbd_2298 Tbd_2298 phnC phnC Tbd_2300 Tbd_2300 Tbd_2301 Tbd_2301
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tbd_0153ABC transport system periplasmic component. (282 aa)
Tbd_2288Phosphonate metabolism protein, PhnP. (255 aa)
phnNGuanylate kinase/L-type calcium channel region; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (190 aa)
Tbd_2290Amidohydrolase-like protein. (384 aa)
Tbd_2291ABC phosphonate transport system ATPase. (240 aa)
Tbd_2292ABC phosphonate transport system ATPase. (276 aa)
Tbd_2293Phosphonate metabolism protein PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (299 aa)
Tbd_2294Phosphonate metabolism protein. (370 aa)
Tbd_2295Putative PhnH protein, phosphonate metabolism, function unknown. (193 aa)
Tbd_2296Hypothetical protein. (155 aa)
Tbd_2297ABC phosphonate permease. (268 aa)
Tbd_2298ABC phosphonate permease. (271 aa)
phnCABC phosphate/phosphonate transport system ATPase; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (259 aa)
Tbd_2300Phosphonate-binding periplasmic protein. (290 aa)
Tbd_2301Transcriptional Regulator, GntR family. (242 aa)
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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