(13 nodes) Periplasmic binding protein-like I network (Symbiobacterium thermophilum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STH1236	Sugar ABC transporter substrate-binding protein. (355 aa)
	STH1614	Branched chain amino acid ABC transporter substrate-binding protein. (349 aa)
	STH168	Branched-chain amino acid ABC transporter substrate-binding protein. (610 aa)
	STH2192	Putative ABC transporter substrate-binding protein. (365 aa)
	STH2342	Sugar ABC transporter substrate-binding protein. (319 aa)
	STH2343	LacI family transcriptional repressor. (336 aa)
	STH2361	Branched chain amino acid ABC transporter substrate-binding protein. (395 aa)
	STH3024	ABC transporter substrate-binding protein. (337 aa)
	STH707	Branched-chain amino acid ABC transporter substrate-binding protein. (393 aa)
	STH770	LacI family transcriptional repressor. (336 aa)
	STH773	Ribose ABC transporter ATP-binding protein. (429 aa)
	STH803	Putative branched chain amino acid ABC transporter substrate-binding protein. (428 aa)
	STH821	Branched chain amino acid ABC transporter substrate-binding protein. (414 aa)

Your Current Organism:

Symbiobacterium thermophilum

NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
STH1236	STH773	Sugar ABC transporter substrate-binding protein.	Ribose ABC transporter ATP-binding protein.	0.698
STH2192	STH707	Putative ABC transporter substrate-binding protein.	Branched-chain amino acid ABC transporter substrate-binding protein.	0.538
STH2192	STH803	Putative ABC transporter substrate-binding protein.	Putative branched chain amino acid ABC transporter substrate-binding protein.	0.448
STH2342	STH2343	Sugar ABC transporter substrate-binding protein.	LacI family transcriptional repressor.	0.858
STH2342	STH770	Sugar ABC transporter substrate-binding protein.	LacI family transcriptional repressor.	0.742
STH2342	STH773	Sugar ABC transporter substrate-binding protein.	Ribose ABC transporter ATP-binding protein.	0.897
STH2343	STH2342	LacI family transcriptional repressor.	Sugar ABC transporter substrate-binding protein.	0.858
STH2343	STH773	LacI family transcriptional repressor.	Ribose ABC transporter ATP-binding protein.	0.757
STH707	STH2192	Branched-chain amino acid ABC transporter substrate-binding protein.	Putative ABC transporter substrate-binding protein.	0.538
STH770	STH2342	LacI family transcriptional repressor.	Sugar ABC transporter substrate-binding protein.	0.742
STH770	STH773	LacI family transcriptional repressor.	Ribose ABC transporter ATP-binding protein.	0.929
STH773	STH1236	Ribose ABC transporter ATP-binding protein.	Sugar ABC transporter substrate-binding protein.	0.698
STH773	STH2342	Ribose ABC transporter ATP-binding protein.	Sugar ABC transporter substrate-binding protein.	0.897
STH773	STH2343	Ribose ABC transporter ATP-binding protein.	LacI family transcriptional repressor.	0.757
STH773	STH770	Ribose ABC transporter ATP-binding protein.	LacI family transcriptional repressor.	0.929
STH803	STH2192	Putative branched chain amino acid ABC transporter substrate-binding protein.	Putative ABC transporter substrate-binding protein.	0.448

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