STRINGSTRING
ANU42468.1 ANU42468.1 rnhA rnhA deoD deoD pnp pnp dut dut ANU42608.1 ANU42608.1 rny rny ANU42579.1 ANU42579.1 ANU42545.1 ANU42545.1 ANU42497.1 ANU42497.1 ANU42398.1 ANU42398.1 ANU42386.1 ANU42386.1 ANU42267.1 ANU42267.1 ANU42252.2 ANU42252.2 ANU42016.1 ANU42016.1 ANU41917.1 ANU41917.1 rph rph ANU41877.1 ANU41877.1 deoC deoC ANU41639.1 ANU41639.1 ANU41601.1 ANU41601.1 ANU41510.1 ANU41510.1 ANU41471.1 ANU41471.1 xseA xseA xseB xseB ANU41230.2 ANU41230.2 rnhB rnhB ANU41195.1 ANU41195.1 ANU41093.1 ANU41093.1 ANU40925.1 ANU40925.1 ANU40825.1 ANU40825.1 ANU40648.1 ANU40648.1 ANU40217.1 ANU40217.1 csrA csrA ANU40066.1 ANU40066.1 ANU40064.1 ANU40064.1 ANU40042.1 ANU40042.1 ANU39967.1 ANU39967.1 ANU39941.1 ANU39941.1 ANU39768.1 ANU39768.1 ANU39708.1 ANU39708.1 ANU39638.1 ANU39638.1 ANU39633.1 ANU39633.1 ANU39596.1 ANU39596.1 ANU39589.1 ANU39589.1 ANU39588.1 ANU39588.1 ANU39587.1 ANU39587.1 ANU39576.1 ANU39576.1 ANU39570.1 ANU39570.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANU42468.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
rnhARibonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (145 aa)
deoDPurine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (716 aa)
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (149 aa)
ANU42608.1Nucleoside triphosphate pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
rnyRibonuclease Y; Endoribonuclease that initiates mRNA decay. (514 aa)
ANU42579.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (869 aa)
ANU42545.1Multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1044 aa)
ANU42497.1Deoxyuridine 5'-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
ANU42398.1Quinolinate phosphoribosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
ANU42386.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
ANU42267.1Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamate kinase family. (313 aa)
ANU42252.2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (586 aa)
ANU42016.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
ANU41917.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (238 aa)
ANU41877.1Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (196 aa)
deoC2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (221 aa)
ANU41639.1Bifunctional metallophosphatase/5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (641 aa)
ANU41601.1Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily. (334 aa)
ANU41510.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M20A family. (397 aa)
ANU41471.1Uridine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (401 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (77 aa)
ANU41230.2YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (204 aa)
ANU41195.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)
ANU41093.1Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
ANU40925.1methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
ANU40825.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
ANU40648.1Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (131 aa)
ANU40217.1Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (89 aa)
ANU40066.1Bifunctional metallophosphatase/5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (708 aa)
ANU40064.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
ANU40042.1Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
ANU39967.1N-carbamoylsarcosine amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)
ANU39941.1Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
ANU39768.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
ANU39708.1Bifunctional metallophosphatase/5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (726 aa)
ANU39638.1dGTPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily. (492 aa)
ANU39633.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
ANU39596.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
ANU39589.1Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
ANU39588.1Xanthine dehydrogenase FAD-binding subunit XdhB; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
ANU39587.1Xanthine dehydrogenase molybdenum-binding subunit XdhA; Derived by automated computational analysis using gene prediction method: Protein Homology. (766 aa)
ANU39576.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
ANU39570.1Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
Your Current Organism:
Flavonifractor plautii
NCBI taxonomy Id: 292800
Other names: ATCC 29863, ATCC 49531 [[Clostridium orbiscindens]], Bacillus plauti, CCUG 28093, Clostridium orbiscindens, DSM 4000, DSM 6740 [[Clostridium orbiscindens]], DSM 6749 [[Clostridium orbiscindens]], Eubacterium plautii, F. plautii, Fusobacterium plautii, Fusocillus plauti, Pseudoflavonifractor sp. YL31, Zuberella plauti, strain Prevot S1
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