STRINGSTRING
CD943_04045 CD943_04045 CD943_04040 CD943_04040 CD943_02990 CD943_02990 CD943_02900 CD943_02900 CD943_02895 CD943_02895 CD943_15700 CD943_15700 fabH_1 fabH_1 mmsB mmsB CD943_11025 CD943_11025 CD943_10995 CD943_10995 CD943_15870 CD943_15870 GCA_000988015_01188 GCA_000988015_01188 GCA_000988015_01189 GCA_000988015_01189 GCA_000988015_01190 GCA_000988015_01190 GCA_000988015_01191 GCA_000988015_01191 accA accA CD943_01310 CD943_01310 CD943_01460 CD943_01460 CD943_01465 CD943_01465 CD943_01470 CD943_01470 accB accB accC accC fabF fabF fabG fabG fabD fabD CD943_10115 CD943_10115 CD943_11245 CD943_11245 mce mce mutB mutB CD943_02575 CD943_02575 CD943_02580 CD943_02580 CD943_02585 CD943_02585 CD943_02590 CD943_02590 mmsA mmsA fabG-2 fabG-2 CD943_04215 CD943_04215 CD943_05130 CD943_05130 CD943_05200 CD943_05200 acs acs CD943_05530 CD943_05530 CD943_06065 CD943_06065 CD943_06200 CD943_06200 CD943_06210 CD943_06210 etfA etfA CD943_06940 CD943_06940 CD943_07130 CD943_07130 CD943_07180 CD943_07180 fadA_1 fadA_1 CD943_07280 CD943_07280 accD accD CD943_07625 CD943_07625 fabA fabA CD943_07850 CD943_07850 CD943_07855 CD943_07855 CD943_07860 CD943_07860 CD943_09100 CD943_09100 CD943_09115 CD943_09115 CD943_13505 CD943_13505 CD943_13680 CD943_13680 CD943_13690 CD943_13690 CD943_13695 CD943_13695 fabI fabI fadB2 fadB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CD943_04045Unannotated protein. (88 aa)
CD943_04040Unannotated protein. (395 aa)
CD943_02990Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
CD943_02900Unannotated protein. (216 aa)
CD943_02895Unannotated protein. (233 aa)
CD943_15700Unannotated protein. (152 aa)
fabH_1Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (325 aa)
mmsBUnannotated protein; Belongs to the HIBADH-related family. (298 aa)
CD943_11025Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
CD943_10995Unannotated protein. (302 aa)
CD943_15870Unannotated protein. (594 aa)
GCA_000988015_01188Unannotated protein. (428 aa)
GCA_000988015_01189Unannotated protein. (290 aa)
GCA_000988015_01190Unannotated protein. (436 aa)
GCA_000988015_01191Unannotated protein. (790 aa)
accAUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (316 aa)
CD943_01310Unannotated protein. (400 aa)
CD943_01460Unannotated protein. (350 aa)
CD943_01465Unannotated protein. (193 aa)
CD943_01470Unannotated protein. (379 aa)
accBUnannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (162 aa)
accCUnannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (450 aa)
fabFUnannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (426 aa)
fabGUnannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
fabDUnannotated protein. (314 aa)
CD943_10115Unannotated protein; Belongs to the catalase family. (495 aa)
CD943_11245Unannotated protein. (387 aa)
mceUnannotated protein. (140 aa)
mutBUnannotated protein. (719 aa)
CD943_02575Unannotated protein. (459 aa)
CD943_02580Unannotated protein. (658 aa)
CD943_02585Unannotated protein. (511 aa)
CD943_02590Unannotated protein. (470 aa)
mmsAUnannotated protein. (500 aa)
fabG-2Unannotated protein. (254 aa)
CD943_04215Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. (586 aa)
CD943_05130Unannotated protein. (256 aa)
CD943_05200Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (295 aa)
acsUnannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (645 aa)
CD943_05530Unannotated protein; Belongs to the CoA-transferase III family. (352 aa)
CD943_06065Unannotated protein. (265 aa)
CD943_06200Unannotated protein. (372 aa)
CD943_06210Unannotated protein. (394 aa)
etfAUnannotated protein. (309 aa)
CD943_06940Unannotated protein. (254 aa)
CD943_07130Unannotated protein. (263 aa)
CD943_07180Unannotated protein. (333 aa)
fadA_1Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
CD943_07280Unannotated protein. (730 aa)
accDUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (299 aa)
CD943_07625Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
fabAUnannotated protein; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (179 aa)
CD943_07850Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (409 aa)
CD943_07855Unannotated protein. (465 aa)
CD943_07860Unannotated protein. (396 aa)
CD943_09100Unannotated protein. (151 aa)
CD943_09115Unannotated protein. (362 aa)
CD943_13505Unannotated protein. (387 aa)
CD943_13680Unannotated protein. (530 aa)
CD943_13690Unannotated protein. (300 aa)
CD943_13695Unannotated protein. (667 aa)
fabIUnannotated protein. (273 aa)
fadB2Unannotated protein. (292 aa)
Your Current Organism:
Brevundimonas diminuta
NCBI taxonomy Id: 293
Other names: AJ 2067, ATCC 11568, B. diminuta, BCRC 11894, Bacterium parvulum, CCEB 513, CCRC 11894, CCRC:11894, CECT 317, CIP 63.27, DSM 7234, IAM 12691, IFO 12697, IMET 10409, JCM 2788, LMG 2088, LMG 2089, LMG:2088, LMG:2089, NBRC 12697, NCAIM B.01118, NCCB 76050, NCIB 9393, NCIMB 9393, NCTC 8545, Pseudomonas diminuta
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