STRINGSTRING
GCA_000988015_00376 GCA_000988015_00376 mscS_1 mscS_1 CD943_00645 CD943_00645 GCA_000988015_01250 GCA_000988015_01250 CD943_00915 CD943_00915 CD943_10770 CD943_10770 otsB otsB CD943_10795 CD943_10795 CD943_10800 CD943_10800 CD943_09895 CD943_09895 CD943_05650 CD943_05650 dps dps CD943_09330 CD943_09330
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000988015_00376Unannotated protein. (187 aa)
mscS_1Unannotated protein. (376 aa)
CD943_00645Unannotated protein. (252 aa)
GCA_000988015_01250Unannotated protein. (90 aa)
CD943_00915Unannotated protein. (142 aa)
CD943_10770Unannotated protein. (168 aa)
otsBUnannotated protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (285 aa)
CD943_10795Unannotated protein. (594 aa)
CD943_10800Unannotated protein. (458 aa)
CD943_09895Unannotated protein. (365 aa)
CD943_05650Unannotated protein. (178 aa)
dpsUnannotated protein; Belongs to the Dps family. (158 aa)
CD943_09330Unannotated protein. (57 aa)
Your Current Organism:
Brevundimonas diminuta
NCBI taxonomy Id: 293
Other names: AJ 2067, ATCC 11568, B. diminuta, BCRC 11894, Bacterium parvulum, CCEB 513, CCRC 11894, CCRC:11894, CECT 317, CIP 63.27, DSM 7234, IAM 12691, IFO 12697, IMET 10409, JCM 2788, LMG 2088, LMG 2089, LMG:2088, LMG:2089, NBRC 12697, NCAIM B.01118, NCCB 76050, NCIB 9393, NCIMB 9393, NCTC 8545, Pseudomonas diminuta
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