STRINGSTRING
CD943_02990 CD943_02990 CD943_14280 CD943_14280 CD943_11025 CD943_11025 GCA_000988015_01188 GCA_000988015_01188 CD943_01460 CD943_01460 fadA_1 fadA_1 CD943_07280 CD943_07280 CD943_07625 CD943_07625 CD943_07860 CD943_07860 fadB2 fadB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CD943_02990Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
CD943_14280Unannotated protein; Belongs to the 4-oxalocrotonate tautomerase family. (72 aa)
CD943_11025Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
GCA_000988015_01188Unannotated protein. (428 aa)
CD943_01460Unannotated protein. (350 aa)
fadA_1Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
CD943_07280Unannotated protein. (730 aa)
CD943_07625Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
CD943_07860Unannotated protein. (396 aa)
fadB2Unannotated protein. (292 aa)
Your Current Organism:
Brevundimonas diminuta
NCBI taxonomy Id: 293
Other names: AJ 2067, ATCC 11568, B. diminuta, BCRC 11894, Bacterium parvulum, CCEB 513, CCRC 11894, CCRC:11894, CECT 317, CIP 63.27, DSM 7234, IAM 12691, IFO 12697, IMET 10409, JCM 2788, LMG 2088, LMG 2089, LMG:2088, LMG:2089, NBRC 12697, NCAIM B.01118, NCCB 76050, NCIB 9393, NCIMB 9393, NCTC 8545, Pseudomonas diminuta
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