STRINGSTRING
CCDG5_2030 CCDG5_2030 CCDG5_0662 CCDG5_0662 CCDG5_0770 CCDG5_0770 CCDG5_0807 CCDG5_0807 CCDG5_0818 CCDG5_0818 CCDG5_0829 CCDG5_0829 araP araP CCDG5_1258 CCDG5_1258 CCDG5_1990 CCDG5_1990 CCDG5_0072 CCDG5_0072 CCDG5_1943 CCDG5_1943 CCDG5_1944 CCDG5_1944 CCDG5_2020 CCDG5_2020 CCDG5_1259 CCDG5_1259 CCDG5_1603 CCDG5_1603 yesP yesP amyD amyD CCDG5_1863 CCDG5_1863
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCDG5_2030ABC transporter inner membrane protein; High confidence in function and specificity. (297 aa)
CCDG5_0662Sugar ABC transporter permease; High confidence in function and specificity. (296 aa)
CCDG5_0770Hypothetical protein; High confidence in function and specificity. (290 aa)
CCDG5_0807Sugar ABC transporter permease; High confidence in function and specificity. (294 aa)
CCDG5_0818Hypothetical protein; High confidence in function and specificity. (297 aa)
CCDG5_0829Binding-protein-dependent transporters inner membrane component; High confidence in function and specificity. (301 aa)
araPL-arabinose transport system permease protein AraP; High confidence in function and specificity. (309 aa)
CCDG5_1258ABC transporter permease; High confidence in function and specificity. (443 aa)
CCDG5_1990Binding-protein-dependent transport system inner membrane protein; High confidence in function and specificity. (295 aa)
CCDG5_0072ABC transporter inner membrane protein; High confidence in function and specificity. (294 aa)
CCDG5_1943Hypothetical protein; Family membership. (68 aa)
CCDG5_1944Transport protein; High confidence in function and specificity. (227 aa)
CCDG5_2020Sugar ABC transporter permease; High confidence in function and specificity. (290 aa)
CCDG5_1259ABC transporter permease; High confidence in function and specificity. (274 aa)
CCDG5_1603ABC transporter; High confidence in function and specificity. (290 aa)
yesPPutative ABC transporter permease protein YesP; High confidence in function and specificity. (298 aa)
amyDPutative starch degradation products transport system permease protein AmyD; High confidence in function and specificity. (280 aa)
CCDG5_1863ABC transporter permease; High confidence in function and specificity. (322 aa)
Your Current Organism:
Clostridium cellulosi
NCBI taxonomy Id: 29343
Other names: [. cellulosi, [Clostridium] cellulosi
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