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| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (375 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (652 aa) |
| | CCDG5_0028 | Hypothetical protein. (228 aa) |
| | CCDG5_0029 | Hydantoinase/oxoprolinase; High confidence in function and specificity. (719 aa) |
| | CCDG5_0034 | Metallophosphoesterase; High confidence in function and specificity. (262 aa) |
| | CCDG5_0064 | P-type HAD superfamily ATPase; High confidence in function and specificity. (873 aa) |
| | CCDG5_0066 | MgtE integral membrane protein; High confidence in function and specificity. (411 aa) |
| | CCDG5_0130 | Hypothetical protein; High confidence in function and specificity. (284 aa) |
| | CCDG5_0131 | 8-oxoguanine DNA glycosylase; High confidence in function and specificity. (273 aa) |
| | CCDG5_0144 | Hypothetical protein; High confidence in function and specificity. (519 aa) |
| | rpsI | 30S ribosomal protein S9; High confidence in function and specificity; Belongs to the universal ribosomal protein uS9 family. (132 aa) |
| | rpsJ | Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (211 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (207 aa) |
| | rplW | Hypothetical protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (98 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (277 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (113 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (222 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (141 aa) |
| | rpmC | Hypothetical protein; Belongs to the universal ribosomal protein uL29 family. (68 aa) |
| | rpsQ | Hypothetical protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (108 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (184 aa) |
| | rplR | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (119 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (166 aa) |
| | rpmD | Hypothetical protein. (59 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (146 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (210 aa) |
| | CCDG5_0204 | Hypothetical protein. (86 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (122 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (135 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa) |
| | rplQ | 50S ribosomal protein L17; High confidence in function and specificity. (113 aa) |
| | dtd | Hypothetical protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (149 aa) |
| | CCDG5_0225 | Phosphoribulokinase / uridine kinase family protein; High confidence in function and specificity. (320 aa) |
| | CCDG5_0226 | Hypothetical protein; Family membership. (118 aa) |
| | CCDG5_0228 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa) |
| | pduL | Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (190 aa) |
| | CCDG5_0232 | Hypothetical protein; High confidence in function and specificity. (237 aa) |
| | CCDG5_0253 | Hypothetical protein; High confidence in function and specificity. (355 aa) |
| | glnA3-1 | Type-3 glutamine synthetase; High confidence in function and specificity; Belongs to the glutamine synthetase family. (699 aa) |
| | speB | Agmatinase; High confidence in function and specificity; Belongs to the arginase family. (292 aa) |
| | CCDG5_0315 | Hypothetical protein; High confidence in function and specificity. (166 aa) |
| | FRK1 | Fructokinase-1; High confidence in function and specificity. (331 aa) |
| | purF | Putative amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (473 aa) |
| | purD | Phosphoribosylamine-glycine ligase; High confidence in function and specificity; Belongs to the GARS family. (422 aa) |
| | CCDG5_0419 | Hypothetical protein; High confidence in function and specificity. (232 aa) |
| | CCDG5_0437 | RNA binding S1 domain-containing protein; High confidence in function and specificity. (306 aa) |
| | leuA1 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. (558 aa) |
| | CCDG5_0452 | Hypothetical protein; Family membership. (132 aa) |
| | rpmI | Hypothetical protein; Family membership; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | rplT | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa) |
| | topA | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (692 aa) |
| | smc | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1190 aa) |
| | rpsU | Hypothetical protein; Belongs to the bacterial ribosomal protein bS21 family. (57 aa) |
| | CCDG5_0480 | Hypothetical protein; High confidence in function and specificity. (290 aa) |
| | mcsB | Putative ATP:guanido phosphotransferase TTE2328; Catalyzes the specific phosphorylation of arginine residues in proteins. (338 aa) |
| | hpf | Hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (172 aa) |
| | dus1 | Putative tRNA-dihydrouridine synthase 1; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (321 aa) |
| | rpsT | Hypothetical protein; Binds directly to 16S ribosomal RNA. (83 aa) |
| | CCDG5_0569 | TOPRIM domain-containing protein; High confidence in function and specificity. (194 aa) |
| | CCDG5_0575 | PfkB domain protein; High confidence in function and specificity. (328 aa) |
| | CCDG5_0593 | ToxD protein; High confidence in function and specificity. (238 aa) |
| | CCDG5_0594 | Hypothetical protein; Family membership. (613 aa) |
| | mrnC | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (147 aa) |
| | rpsF | Hypothetical protein; Binds together with S18 to 16S ribosomal RNA. (97 aa) |
| | rpsR | Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (81 aa) |
| | araD | L-ribulose-5-phosphate 4-epimerase; High confidence in function and specificity. (231 aa) |
| | CCDG5_0631 | O-acetylhomoserine (thiol)-lyase; High confidence in function and specificity. (426 aa) |
| | CCDG5_0650 | Hypothetical protein; Family membership. (389 aa) |
| | CCDG5_0681 | Primosome subunit DnaD; High confidence in function and specificity. (321 aa) |
| | CCDG5_0682 | AAA ATPase; High confidence in function and specificity. (329 aa) |
| | iscS1 | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. (391 aa) |
| | rnhA | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. (154 aa) |
| | dnaC2 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (451 aa) |
| | CCDG5_0699 | DNA topoisomerase; High confidence in function and specificity. (662 aa) |
| | CCDG5_0747 | Hypothetical protein; High confidence in function and specificity. (252 aa) |
| | glnA3-2 | Type-3 glutamine synthetase; High confidence in function and specificity; Belongs to the glutamine synthetase family. (697 aa) |
| | gltB | Archaeal glutamate synthase [NADPH]; High confidence in function and specificity; Belongs to the glutamate synthase family. (502 aa) |
| | CCDG5_0798 | Hypothetical protein; High confidence in function and specificity. (456 aa) |
| | pvuIIM | Modification methylase PvuII; High confidence in function and specificity; Belongs to the N(4)/N(6)-methyltransferase family. (346 aa) |
| | CCDG5_0838 | O-acetylhomoserine (thiol)-lyase; High confidence in function and specificity. (428 aa) |
| | cysD | O-acetylhomoserine (thiol)-lyase; High confidence in function and specificity. (438 aa) |
| | nifH4 | Nitrogenase iron protein 4; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (284 aa) |
| | CCDG5_0851 | Hypothetical protein; Family membership. (381 aa) |
| | CCDG5_0875 | P-type HAD superfamily ATPase; High confidence in function and specificity. (911 aa) |
| | CCDG5_0877 | AMP-dependent synthetase and ligase; High confidence in function and specificity. (557 aa) |
| | CCDG5_0916 | Amino acid adenylation protein; High confidence in function and specificity. (3289 aa) |
| | CCDG5_0919 | Hypothetical protein; Family membership; Belongs to the ATP-dependent AMP-binding enzyme family. (2692 aa) |
| | CCDG5_0936 | AMP-dependent synthetase and ligase; High confidence in function and specificity. (556 aa) |
| | add | Adenosine deaminase; High confidence in function and specificity; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. (339 aa) |
| | CCDG5_0959 | Cysteine desulfurase; High confidence in function and specificity. (373 aa) |
| | rpmB | Hypothetical protein; Family membership; Belongs to the bacterial ribosomal protein bL28 family. (62 aa) |
| | yrvM | Putative protein YrvM; High confidence in function and specificity. (253 aa) |
| | CCDG5_1011 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (140 aa) |
| | GGPPS1 | Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic; High confidence in function and specificity; Belongs to the FPP/GGPP synthase family. (298 aa) |
| | CCDG5_1060 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (558 aa) |
| | CCDG5_1072 | Hypothetical protein; Family membership. (166 aa) |
| | CCDG5_1094 | DNA repair protein RadC; High confidence in function and specificity; Belongs to the UPF0758 family. (246 aa) |
| | CCDG5_1116 | Putative AIPM/Hcit synthase family transferase aq_356; High confidence in function and specificity; Belongs to the alpha-IPM synthase/homocitrate synthase family. (531 aa) |
| | leuA3 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (511 aa) |
| | CCDG5_1126 | uracil-DNA glycosylase; High confidence in function and specificity. (166 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (432 aa) |
| | rbgA | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (292 aa) |
| | rplS | Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (113 aa) |
| | CCDG5_1152 | Hypothetical protein; Family membership. (182 aa) |
| | CCDG5_1155 | Hypothetical protein; Family membership. (97 aa) |
| | tadA | Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (165 aa) |
| | CCDG5_1188 | Thioesterase superfamily protein; High confidence in function and specificity. (157 aa) |
| | CCDG5_1200 | Hypothetical protein; High confidence in function and specificity. (217 aa) |
| | rpmA | Hypothetical protein; Belongs to the bacterial ribosomal protein bL27 family. (92 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | oppD | Oligopeptide transport ATP-binding protein OppD; High confidence in function and specificity; Belongs to the ABC transporter superfamily. (233 aa) |
| | CCDG5_1227 | Hypothetical protein; Family membership. (96 aa) |
| | pdxS | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (292 aa) |
| | CCDG5_1248 | Carboxynorspermidine decarboxylase; High confidence in function and specificity. (375 aa) |
| | fhs | Formate-tetrahydrofolate ligase; High confidence in function and specificity; Belongs to the formate--tetrahydrofolate ligase family. (555 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (822 aa) |
| | CCDG5_1305 | Carbonic anhydrase/acetyltransferase; High confidence in function and specificity. (161 aa) |
| | rpsP | Hypothetical protein; Belongs to the bacterial ribosomal protein bS16 family. (80 aa) |
| | atpB2 | V-type ATP synthase beta chain 2; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (466 aa) |
| | CCDG5_1339 | Vacuolar H+transporting two-sector ATPase F subunit; High confidence in function and specificity. (102 aa) |
| | CCDG5_1342 | H+transporting two-sector ATPase C (AC39) subunit; High confidence in function and specificity. (349 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (403 aa) |
| | ispE | Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (266 aa) |
| | serC | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (360 aa) |
| | rpmF | Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family. (60 aa) |
| | CCDG5_1410 | Hypothetical protein; High confidence in function and specificity. (133 aa) |
| | CCDG5_1426 | Hypothetical protein; Family membership. (109 aa) |
| | CCDG5_1429 | Crp/Fnr family transcriptional regulator; High confidence in function and specificity. (228 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (258 aa) |
| | engD | GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (384 aa) |
| | cobB | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (253 aa) |
| | CCDG5_1486 | Hypothetical protein; Family membership; Belongs to the SOS response-associated peptidase family. (192 aa) |
| | rplL | Hypothetical protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (127 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (177 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (230 aa) |
| | rplK | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | rpmG | Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family. (49 aa) |
| | arsA | Arsenical pump-driving ATPase; High confidence in function and specificity. (578 aa) |
| | CCDG5_1514 | Hypothetical protein. (101 aa) |
| | DnaC | DNA replication protein; High confidence in function and specificity. (228 aa) |
| | CCDG5_1557 | Putative metal dependent hydrolase; High confidence in function and specificity. (262 aa) |
| | fabF | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (410 aa) |
| | CCDG5_1583 | Putative transketolase N-terminal section; High confidence in function and specificity. (281 aa) |
| | CCDG5_1589 | RNA-binding S4 domain-containing protein; High confidence in function and specificity. (254 aa) |
| | CCDG5_1631 | Putative signal transduction protein with CBS domains; High confidence in function and specificity. (136 aa) |
| | CCDG5_1638 | Putative AIPM/Hcit synthase family transferase aq_356; High confidence in function and specificity; Belongs to the alpha-IPM synthase/homocitrate synthase family. (532 aa) |
| | rpsB | 30S ribosomal protein S2; High confidence in function and specificity; Belongs to the universal ribosomal protein uS2 family. (282 aa) |
| | CCDG5_1653 | Cation diffusion facilitator family transporter; High confidence in function and specificity; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (390 aa) |
| | CCDG5_1654 | Hypothetical protein. (95 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (143 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (586 aa) |
| | rpmE | Hypothetical protein; Binds the 23S rRNA. (67 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (253 aa) |
| | CCDG5_1690 | Diacylglycerol kinase; High confidence in function and specificity. (160 aa) |
| | ybeY | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (168 aa) |
| | CCDG5_1700 | Hypothetical protein; Family membership; Belongs to the thioredoxin family. (103 aa) |
| | CCDG5_1705 | RNA binding S1 domain-containing protein; High confidence in function and specificity. (142 aa) |
| | argB | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (287 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. (317 aa) |
| | CCDG5_1716 | Hypothetical protein; High confidence in function and specificity. (231 aa) |
| | pckG | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (588 aa) |
| | CCDG5_1773 | Putative membrane protein. (158 aa) |
| | iscS3 | Putative cysteine desulfurase; High confidence in function and specificity. (386 aa) |
| | sbcD | Hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (379 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa) |
| | CCDG5_1820 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (115 aa) |
| | CCDG5_1839 | NAD-dependent epimerase/dehydratase; High confidence in function and specificity. (354 aa) |
| | CCDG5_1861 | Putative transketolase N-terminal section; High confidence in function and specificity. (272 aa) |
| | nadC | Putative nicotinate-nucleotide pyrophosphorylase; High confidence in function and specificity; Belongs to the NadC/ModD family. (278 aa) |
| | CCDG5_1941 | Putative transketolase N-terminal section; High confidence in function and specificity. (272 aa) |
| | CCDG5_1946 | XRE family transcriptional regulator; High confidence in function and specificity. (179 aa) |
| | yrvN | Putative AAA domain-containing protein YrvN; High confidence in function and specificity. (419 aa) |
| | rpsO | Hypothetical protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (87 aa) |
| | CCDG5_2009 | Putative aminoglycoside phosphotransferase; High confidence in function and specificity. (302 aa) |
| | CCDG5_2013 | Nucleoside-diphosphate-sugar epimerase; High confidence in function and specificity. (360 aa) |
| | CCDG5_2014 | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; High confidence in function and specificity. (347 aa) |
| | CCDG5_2015 | Dehydrogenase E1 component; High confidence in function and specificity. (352 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (210 aa) |
| | CCDG5_2070 | Riboflavin biosynthesis protein RibF; High confidence in function and specificity; Belongs to the ribF family. (289 aa) |
| | CCDG5_2072 | Phosphoesterase RecJ domain-containing protein; High confidence in function and specificity. (332 aa) |
| | CCDG5_2075 | Hypothetical protein; Family membership. (114 aa) |
| | spo0J | Stage 0 sporulation protein J; High confidence in function and specificity; Belongs to the ParB family. (283 aa) |
| | noc | Nucleoid occlusion protein; High confidence in function and specificity; Belongs to the ParB family. (275 aa) |
