STRINGSTRING
mmgC_1 mmgC_1 fadB_1 fadB_1 CEL27180.1 CEL27180.1 CEL27396.1 CEL27396.1 fabG_2 fabG_2 mmsA_2 mmsA_2 mmsB mmsB echA8_1 echA8_1 lplT lplT CEL28382.1 CEL28382.1 fadA_1 fadA_1 fadJ fadJ fadB_2 fadB_2 mmgC_2 mmgC_2 echA8_2 echA8_2 mmgC_3 mmgC_3 echA8_3 echA8_3 mmgC_4 mmgC_4 thlA_1 thlA_1 lvr_1 lvr_1 acsA_1 acsA_1 CEL29564.1 CEL29564.1 bdhA bdhA acs_1 acs_1 gpmA_1 gpmA_1 CEL29839.1 CEL29839.1 fabG_6 fabG_6 scoA scoA scoB scoB thlA_2 thlA_2 bbsG bbsG yngG yngG fadD_1 fadD_1 mmgC_5 mmgC_5 CEL30149.1 CEL30149.1 echA8_4 echA8_4 fadA_2 fadA_2 fadB_3 fadB_3 CEL30482.1 CEL30482.1 CEL30483.1 CEL30483.1 kstR2 kstR2 CEL30485.1 CEL30485.1 fadH_2 fadH_2 accD5 accD5 acdA acdA caiD_2 caiD_2 accA1_2 accA1_2 polC_1 polC_1 ppnP ppnP caiD_3 caiD_3 fadA_3 fadA_3 etfA_1 etfA_1 etfB etfB CEL30705.1 CEL30705.1 fadE fadE yfmJ yfmJ fadD_2 fadD_2 fadD_3 fadD_3 ytpA_1 ytpA_1 phaJ phaJ echA8_5 echA8_5 CEL31395.1 CEL31395.1 atoE atoE aidB aidB CEL31688.1 CEL31688.1 mmgC_7 mmgC_7 acrC acrC mmgC_8 mmgC_8 CEL31942.1 CEL31942.1 etfA_2 etfA_2 qorA_3 qorA_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mmgC_1Acyl-CoA dehydrogenase. (393 aa)
fadB_1Fatty acid oxidation complex subunit alpha. (408 aa)
CEL27180.1Acyl-CoA dehydrogenase, short-chain specific. (600 aa)
CEL27396.1Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. (284 aa)
fabG_23-oxoacyl-[acyl-carrier-protein] reductase FabG. (450 aa)
mmsA_2Methylmalonate-semialdehyde dehydrogenase [acylating]. (508 aa)
mmsB3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (300 aa)
echA8_1Putative enoyl-CoA hydratase echA8. (370 aa)
lplTLysophospholipid transporter LplT. (624 aa)
CEL28382.1Creatinase. (404 aa)
fadA_1Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
fadJFatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family. (714 aa)
fadB_2Putative enoyl-CoA hydratase. (229 aa)
mmgC_2Acyl-CoA dehydrogenase. (382 aa)
echA8_2Putative enoyl-CoA hydratase echA8. (368 aa)
mmgC_3Acyl-CoA dehydrogenase. (383 aa)
echA8_3Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
mmgC_4Acyl-CoA dehydrogenase. (375 aa)
thlA_1Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
lvr_1Levodione reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)
acsA_1Acetyl-coenzyme A synthetase. (554 aa)
CEL29564.1Citrate transporter. (463 aa)
bdhAD-beta-hydroxybutyrate dehydrogenase. (257 aa)
acs_1Acetyl-coenzyme A synthetase. (651 aa)
gpmA_12,3-bisphosphoglycerate-dependent phosphoglycerate mutase. (236 aa)
CEL29839.1Phosphotransferase enzyme family protein. (355 aa)
fabG_63-oxoacyl-[acyl-carrier-protein] reductase FabG. (255 aa)
scoAPutative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A. (232 aa)
scoBPutative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B. (221 aa)
thlA_2Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
bbsG(R)-benzylsuccinyl-CoA dehydrogenase. (409 aa)
yngGHydroxymethylglutaryl-CoA lyase YngG. (299 aa)
fadD_1Long-chain-fatty-acid--CoA ligase. (565 aa)
mmgC_5Acyl-CoA dehydrogenase. (387 aa)
CEL30149.1Hydroxycinnamoyl-CoA hydratase-lyase; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)
echA8_4Putative enoyl-CoA hydratase echA8. (256 aa)
fadA_23-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)
fadB_3Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (715 aa)
CEL30482.1Hypothetical protein. (394 aa)
CEL30483.1Bacterial extracellular solute-binding proteins, family 3. (265 aa)
kstR2HTH-type transcriptional repressor KstR2. (207 aa)
CEL30485.1Hypothetical protein. (596 aa)
fadH_2Putative 2,4-dienoyl-CoA reductase. (289 aa)
accD5Putative propionyl-CoA carboxylase beta chain 5. (538 aa)
acdAAcyl-CoA dehydrogenase. (385 aa)
caiD_2Carnitinyl-CoA dehydratase. (265 aa)
accA1_2Acetyl-/propionyl-coenzyme A carboxylase alpha chain. (653 aa)
polC_1DNA polymerase III PolC-type. (180 aa)
ppnPHypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. (94 aa)
caiD_3Carnitinyl-CoA dehydratase. (263 aa)
fadA_33-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
etfA_1Electron transfer flavoprotein subunit alpha. (309 aa)
etfBElectron transfer flavoprotein subunit beta. (249 aa)
CEL30705.1Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (554 aa)
fadEAcyl-coenzyme A dehydrogenase. (815 aa)
yfmJPutative NADP-dependent oxidoreductase YfmJ. (334 aa)
fadD_2Long-chain-fatty-acid--CoA ligase. (565 aa)
fadD_3Long-chain-fatty-acid--CoA ligase. (562 aa)
ytpA_1Phospholipase YtpA. (314 aa)
phaJ(R)-specific enoyl-CoA hydratase. (156 aa)
echA8_5Putative enoyl-CoA hydratase echA8. (249 aa)
CEL31395.1Long-chain-fatty-acid--CoA ligase. (560 aa)
atoEShort-chain fatty acids transporter. (472 aa)
aidBPutative acyl-CoA dehydrogenase AidB. (549 aa)
CEL31688.1Putative enoyl-CoA hydratase 1. (151 aa)
mmgC_7Acyl-CoA dehydrogenase. (592 aa)
acrCAcryloyl-CoA reductase (NADH). (598 aa)
mmgC_8Acyl-CoA dehydrogenase. (601 aa)
CEL31942.1Electron transfer flavoprotein domain protein. (256 aa)
etfA_2Electron transfer flavoprotein subunit alpha. (406 aa)
qorA_3Quinone oxidoreductase 1. (325 aa)
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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