STRINGSTRING
gbuC_1 gbuC_1 betC_1 betC_1 davD davD davT davT betT_1 betT_1 proX_1 proX_1 opuAB_1 opuAB_1 opuAA opuAA modB_1 modB_1 fbpA fbpA gabD gabD puuB_1 puuB_1 cueR_1 cueR_1 CEL27436.1 CEL27436.1 hmrR_2 hmrR_2 opuBA opuBA opuBB opuBB osmF osmF opuCD opuCD CEL27673.1 CEL27673.1 CEL27680.1 CEL27680.1 hcnC_1 hcnC_1 ala ala prr_1 prr_1 ydcV_1 ydcV_1 ydcU ydcU potA_1 potA_1 potF_1 potF_1 prr_2 prr_2 gltC_2 gltC_2 opuAC_1 opuAC_1 CEL28325.1 CEL28325.1 mdtD mdtD HAAO HAAO cdhR_1 cdhR_1 cdhR_2 cdhR_2 serB_2 serB_2 potA_2 potA_2 cysW_2 cysW_2 cysW_3 cysW_3 CEL28424.1 CEL28424.1 CEL28425.1 CEL28425.1 phnR phnR puuB_2 puuB_2 potF_2 potF_2 ydcV_2 ydcV_2 potH_1 potH_1 potA_3 potA_3 puuD puuD puuA_1 puuA_1 puuC_1 puuC_1 puuB_3 puuB_3 puuB_4 puuB_4 puuA_2 puuA_2 CEL28917.1 CEL28917.1 dadA_1 dadA_1 CEL28919.1 CEL28919.1 dapA_2 dapA_2 CEL28921.1 CEL28921.1 btr btr CEL28924.1 CEL28924.1 cdhR_5 cdhR_5 CEL29055.1 CEL29055.1 hmuV_1 hmuV_1 hmuU_1 hmuU_1 btuF_1 btuF_1 puuA_3 puuA_3 ycnE_2 ycnE_2 aceE_2 aceE_2 CEL29295.1 CEL29295.1 CEL29296.1 CEL29296.1 gbuC_2 gbuC_2 CEL29298.1 CEL29298.1 ybjJ_1 ybjJ_1 gbuC_3 gbuC_3 CEL29372.1 CEL29372.1 CEL29373.1 CEL29373.1 potF_3 potF_3 puuB_5 puuB_5 efeU_1 efeU_1 efeO_1 efeO_1 efeB efeB efeO_2 efeO_2 potF_4 potF_4 CEL29415.1 CEL29415.1 afr afr yfeX yfeX virS_4 virS_4 CEL29643.1 CEL29643.1 potD potD potH_2 potH_2 ydcV_3 ydcV_3 potA_4 potA_4 phnX_1 phnX_1 potF_5 potF_5 CEL29748.1 CEL29748.1 betA_2 betA_2 dgoD_1 dgoD_1 yihN yihN aldA aldA CEL29754.1 CEL29754.1 proX_2 proX_2 alkJ alkJ proP_5 proP_5 glsA2 glsA2 hcnC_2 hcnC_2 hcnB hcnB hcnA hcnA CEL29936.1 CEL29936.1 CEL29937.1 CEL29937.1 CEL29938.1 CEL29938.1 cueR_2 cueR_2 puuB_6 puuB_6 phnW_2 phnW_2 phnX_2 phnX_2 mlaA_2 mlaA_2 phnX_3 phnX_3 CEL30404.1 CEL30404.1 CEL31060.1 CEL31060.1 CEL31061.1 CEL31061.1 CEL31062.1 CEL31062.1 CEL31063.1 CEL31063.1 CEL31074.1 CEL31074.1 CEL31075.1 CEL31075.1 fbpC fbpC CEL31328.1 CEL31328.1 CEL31476.1 CEL31476.1 hmuV_2 hmuV_2 hmuU_2 hmuU_2 hmuT hmuT ydcV_4 ydcV_4 potH_3 potH_3 potF_6 potF_6 potA_5 potA_5 fdhA fdhA CEL31930.1 CEL31930.1 gcvT_2 gcvT_2 soxD soxD hcr_1 hcr_1 antA antA lutA_3 lutA_3 stcD stcD CEL31946.1 CEL31946.1 CEL31947.1 CEL31947.1 gbuC_4 gbuC_4 kce kce lcdH_1 lcdH_1 lcdH_2 lcdH_2 CEL31955.1 CEL31955.1 cdhR_11 cdhR_11 opuAC_2 opuAC_2 opuAB_2 opuAB_2 proV proV betI_2 betI_2 betB_2 betB_2 CEL31996.1 CEL31996.1 CEL32080.1 CEL32080.1 tcyP tcyP CEL32085.1 CEL32085.1 soxA soxA CEL32087.1 CEL32087.1 phnU phnU cysA_3 cysA_3 cmpR_9 cmpR_9 cadA_1 cadA_1 zntR zntR ydcV_5 ydcV_5 potH_4 potH_4 potA_6 potA_6 potF_7 potF_7 potF_8 potF_8 CEL32176.1 CEL32176.1 puuA_5 puuA_5 CEL32178.1 CEL32178.1 puuA_6 puuA_6 cysW_4 cysW_4 CEL32201.1 CEL32201.1 efeU_2 efeU_2 puuR_3 puuR_3 alr alr yabJ_3 yabJ_3 dadA_2 dadA_2 lrp_5 lrp_5 puuB_7 puuB_7 ycaD_3 ycaD_3 puuC_2 puuC_2 CEL32300.1 CEL32300.1 mmuM mmuM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gbuC_1Glycine betaine/carnitine transport binding protein GbuC precursor. (306 aa)
betC_1Choline-sulfatase. (510 aa)
davDGlutarate-semialdehyde dehydrogenase DavD; Belongs to the aldehyde dehydrogenase family. (480 aa)
davT5-aminovalerate aminotransferase DavT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
betT_1High-affinity choline transport protein; Belongs to the BCCT transporter (TC 2.A.15) family. (666 aa)
proX_1Glycine betaine-binding periplasmic protein precursor. (322 aa)
opuAB_1Glycine betaine transport system permease protein OpuAB. (283 aa)
opuAAGlycine betaine transport ATP-binding protein OpuAA. (276 aa)
modB_1Molybdenum transport system permease protein ModB. (521 aa)
fbpAIron-utilization periplasmic protein precursor. (336 aa)
gabDSuccinate-semialdehyde dehydrogenase [NADP(+)]; Belongs to the aldehyde dehydrogenase family. (496 aa)
puuB_1Gamma-glutamylputrescine oxidoreductase. (427 aa)
cueR_1HTH-type transcriptional regulator CueR. (118 aa)
CEL27436.1Hypothetical protein. (116 aa)
hmrR_2HTH-type transcriptional regulator HmrR. (123 aa)
opuBACholine transport ATP-binding protein OpuBA. (385 aa)
opuBBCholine transport system permease protein OpuBB. (217 aa)
osmFPutative osmoprotectant uptake system substrate-binding protein OsmF precursor. (297 aa)
opuCDCarnitine transport permease protein OpuCD. (238 aa)
CEL27673.1Hypothetical protein; Belongs to the UPF0246 family. (259 aa)
CEL27680.1YheO-like PAS domain protein. (208 aa)
hcnC_1Hydrogen cyanide synthase subunit HcnC precursor. (375 aa)
alaAlanine dehydrogenase. (314 aa)
prr_1Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (474 aa)
ydcV_1Inner membrane ABC transporter permease protein YdcV. (269 aa)
ydcUInner membrane ABC transporter permease protein YdcU. (306 aa)
potA_1Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (345 aa)
potF_1Putrescine-binding periplasmic protein precursor. (383 aa)
prr_2Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (495 aa)
gltC_2HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. (304 aa)
opuAC_1Glycine betaine-binding protein OpuAC precursor. (283 aa)
CEL28325.1Bacterial regulatory proteins, tetR family. (180 aa)
mdtDPutative multidrug resistance protein MdtD. (399 aa)
HAAO3-hydroxyanthranilate 3,4-dioxygenase. (103 aa)
cdhR_1HTH-type transcriptional regulator CdhR. (210 aa)
cdhR_2HTH-type transcriptional regulator CdhR. (339 aa)
serB_2Phosphoserine phosphatase. (217 aa)
potA_2Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (329 aa)
cysW_2Sulfate transport system permease protein CysW. (266 aa)
cysW_3Sulfate transport system permease protein CysW. (281 aa)
CEL28424.1Type I phosphodiesterase / nucleotide pyrophosphatase. (268 aa)
CEL28425.1Hypothetical protein. (355 aa)
phnRPutative transcriptional regulator of 2-aminoethylphosphonate degradation operons. (237 aa)
puuB_2Gamma-glutamylputrescine oxidoreductase. (427 aa)
potF_2Putrescine-binding periplasmic protein precursor. (365 aa)
ydcV_2Inner membrane ABC transporter permease protein YdcV. (291 aa)
potH_1Putrescine transport system permease protein PotH. (304 aa)
potA_3Spermidine/putrescine import ATP-binding protein PotA. (380 aa)
puuDGamma-glutamyl-gamma-aminobutyrate hydrolase PuuD. (253 aa)
puuA_1Gamma-glutamylputrescine synthetase PuuA. (458 aa)
puuC_1Aldehyde dehydrogenase PuuC. (496 aa)
puuB_3Gamma-glutamylputrescine oxidoreductase. (427 aa)
puuB_4Gamma-glutamylputrescine oxidoreductase. (427 aa)
puuA_2Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family. (454 aa)
CEL28917.1Hypothetical protein. (119 aa)
dadA_1D-amino acid dehydrogenase small subunit. (421 aa)
CEL28919.1Alpha-ketoglutaric semialdehyde dehydrogenase. (530 aa)
dapA_24-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (315 aa)
CEL28921.14-hydroxyproline epimerase; Belongs to the proline racemase family. (308 aa)
btrHTH-type transcriptional activator Btr. (257 aa)
CEL28924.1Hypothetical protein. (95 aa)
cdhR_5HTH-type transcriptional regulator CdhR. (341 aa)
CEL29055.1Hypothetical protein. (440 aa)
hmuV_1Hemin import ATP-binding protein HmuV. (263 aa)
hmuU_1Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (338 aa)
btuF_1Vitamin B12-binding protein. (337 aa)
puuA_3Gamma-glutamylputrescine synthetase PuuA. (468 aa)
ycnE_2Putative monooxygenase YcnE. (102 aa)
aceE_2Pyruvate dehydrogenase E1 component. (887 aa)
CEL29295.1Major royal jelly protein. (361 aa)
CEL29296.1Glyoxalase-like domain protein. (156 aa)
gbuC_2Glycine betaine/carnitine transport binding protein GbuC precursor. (301 aa)
CEL29298.1Hypothetical protein. (158 aa)
ybjJ_1Inner membrane protein YbjJ. (421 aa)
gbuC_3Glycine betaine/carnitine transport binding protein GbuC precursor. (297 aa)
CEL29372.1Hypothetical protein. (43 aa)
CEL29373.1Hypothetical protein. (84 aa)
potF_3Putrescine-binding periplasmic protein precursor. (362 aa)
puuB_5Gamma-glutamylputrescine oxidoreductase. (433 aa)
efeU_1Ferrous iron permease EfeU. (279 aa)
efeO_1Iron uptake system component EfeO precursor. (399 aa)
efeBDeferrochelatase/peroxidase EfeB precursor; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (432 aa)
efeO_2Iron uptake system component EfeO precursor. (274 aa)
potF_4Putrescine-binding periplasmic protein precursor. (361 aa)
CEL29415.1Hypothetical protein. (114 aa)
afr1,5-anhydro-D-fructose reductase. (321 aa)
yfeXPutative deferrochelatase/peroxidase YfeX. (295 aa)
virS_4HTH-type transcriptional regulator VirS. (346 aa)
CEL29643.1Hypothetical protein. (315 aa)
potDSpermidine/putrescine-binding periplasmic protein precursor. (341 aa)
potH_2Putrescine transport system permease protein PotH. (315 aa)
ydcV_3Inner membrane ABC transporter permease protein YdcV. (269 aa)
potA_4Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (384 aa)
phnX_1Phosphonoacetaldehyde hydrolase. (275 aa)
potF_5Putrescine-binding periplasmic protein precursor. (366 aa)
CEL29748.1Hypothetical protein. (201 aa)
betA_2Oxygen-dependent choline dehydrogenase. (537 aa)
dgoD_1D-galactonate dehydratase. (405 aa)
yihNInner membrane protein YihN. (439 aa)
aldALactaldehyde dehydrogenase. (476 aa)
CEL29754.1Hypothetical protein. (392 aa)
proX_2Glycine betaine-binding periplasmic protein precursor. (338 aa)
alkJAlcohol dehydrogenase [acceptor]. (548 aa)
proP_5Proline/betaine transporter. (540 aa)
glsA2Glutaminase 2; Belongs to the glutaminase family. (302 aa)
hcnC_2Hydrogen cyanide synthase subunit HcnC precursor. (419 aa)
hcnBHydrogen cyanide synthase subunit HcnB. (469 aa)
hcnAHydrogen cyanide synthase subunit HcnA. (104 aa)
CEL29936.1Hypothetical protein. (182 aa)
CEL29937.1Hypothetical protein. (313 aa)
CEL29938.1Hypothetical protein. (111 aa)
cueR_2HTH-type transcriptional regulator CueR. (132 aa)
puuB_6Gamma-glutamylputrescine oxidoreductase. (463 aa)
phnW_22-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (369 aa)
phnX_2Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. (275 aa)
mlaA_2Putative phospholipid-binding lipoprotein MlaA precursor. (229 aa)
phnX_3Phosphonoacetaldehyde hydrolase. (206 aa)
CEL30404.1Hypothetical protein. (87 aa)
CEL31060.1Imelysin. (450 aa)
CEL31061.1Cytochrome c. (475 aa)
CEL31062.1Imelysin. (354 aa)
CEL31063.1Hypothetical protein. (310 aa)
CEL31074.1Phage T7 F exclusion suppressor FxsA. (158 aa)
CEL31075.1Pyridoxamine 5'-phosphate oxidase. (243 aa)
fbpCFe(3+) ions import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily. (369 aa)
CEL31328.1Endoribonuclease L-PSP. (163 aa)
CEL31476.1Hypothetical protein. (283 aa)
hmuV_2Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (255 aa)
hmuU_2Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (183 aa)
hmuTHemin-binding periplasmic protein HmuT precursor. (290 aa)
ydcV_4Inner membrane ABC transporter permease protein YdcV. (274 aa)
potH_3Putrescine transport system permease protein PotH. (415 aa)
potF_6Putrescine-binding periplasmic protein precursor. (347 aa)
potA_5Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (362 aa)
fdhAGlutathione-independent formaldehyde dehydrogenase. (399 aa)
CEL31930.1Sarcosine oxidase, gamma subunit family. (210 aa)
gcvT_2Aminomethyltransferase; Belongs to the GcvT family. (1005 aa)
soxDSarcosine oxidase, delta subunit family. (109 aa)
hcr_1NADH oxidoreductase hcr. (366 aa)
antAAnthranilate 1,2-dioxygenase large subunit. (431 aa)
lutA_3Lactate utilization protein A. (649 aa)
stcDPutative N-methylproline demethylase. (686 aa)
CEL31946.1Hypothetical protein. (176 aa)
CEL31947.1Membrane dipeptidase (Peptidase family M19). (325 aa)
gbuC_4Glycine betaine/carnitine transport binding protein GbuC precursor. (314 aa)
kce3-keto-5-aminohexanoate cleavage enzyme. (295 aa)
lcdH_1L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. (321 aa)
lcdH_2L-carnitine dehydrogenase. (158 aa)
CEL31955.1Hypothetical protein. (87 aa)
cdhR_11HTH-type transcriptional regulator CdhR. (367 aa)
opuAC_2Glycine betaine-binding protein OpuAC precursor. (315 aa)
opuAB_2Glycine betaine transport system permease protein OpuAB. (281 aa)
proVGlycine betaine/L-proline transport ATP-binding protein ProV. (392 aa)
betI_2HTH-type transcriptional regulator BetI; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). (197 aa)
betB_2NAD/NADP-dependent betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid. (490 aa)
CEL31996.1Glyoxalase-like domain protein. (137 aa)
CEL32080.1Hypothetical protein. (353 aa)
tcyPL-cystine uptake protein TcyP; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (462 aa)
CEL32085.1HD domain protein. (185 aa)
soxAMonomeric sarcosine oxidase. (377 aa)
CEL32087.1Putative binding protein component of ABC iron transporter precursor. (341 aa)
phnUPutative 2-aminoethylphosphonate transport system permease protein PhnU. (574 aa)
cysA_3Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. (358 aa)
cmpR_9HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. (287 aa)
cadA_1Putative cadmium-transporting ATPase. (751 aa)
zntRHTH-type transcriptional regulator ZntR. (149 aa)
ydcV_5Inner membrane ABC transporter permease protein YdcV. (296 aa)
potH_4Putrescine transport system permease protein PotH. (306 aa)
potA_6Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (380 aa)
potF_7Putrescine-binding periplasmic protein precursor. (365 aa)
potF_8Putrescine-binding periplasmic protein precursor. (370 aa)
CEL32176.1Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (454 aa)
puuA_5Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family. (452 aa)
CEL32178.1Hypothetical protein. (119 aa)
puuA_6Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family. (458 aa)
cysW_4Sulfate transport system permease protein CysW. (538 aa)
CEL32201.1Putative binding protein component of ABC iron transporter precursor. (334 aa)
efeU_2Ferrous iron permease EfeU precursor. (632 aa)
puuR_3HTH-type transcriptional regulator PuuR. (182 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (357 aa)
yabJ_3Enamine/imine deaminase. (117 aa)
dadA_2D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids. (434 aa)
lrp_5Leucine-responsive regulatory protein. (162 aa)
puuB_7Gamma-glutamylputrescine oxidoreductase. (436 aa)
ycaD_3Putative MFS-type transporter YcaD. (380 aa)
puuC_2Aldehyde dehydrogenase PuuC; Belongs to the aldehyde dehydrogenase family. (497 aa)
CEL32300.1Hypothetical protein. (120 aa)
mmuMHomocysteine S-methyltransferase. (299 aa)
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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