10 items (Pseudomonas fluorescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	proX_1	Glycine betaine-binding periplasmic protein precursor. (322 aa)
	opuAB_1	Glycine betaine transport system permease protein OpuAB. (283 aa)
	opuAA	Glycine betaine transport ATP-binding protein OpuAA. (276 aa)
	opuAC_1	Glycine betaine-binding protein OpuAC precursor. (283 aa)
	gbuC_3	Glycine betaine/carnitine transport binding protein GbuC precursor. (297 aa)
	proX_2	Glycine betaine-binding periplasmic protein precursor. (338 aa)
	gbuC_4	Glycine betaine/carnitine transport binding protein GbuC precursor. (314 aa)
	opuAC_2	Glycine betaine-binding protein OpuAC precursor. (315 aa)
	opuAB_2	Glycine betaine transport system permease protein OpuAB. (281 aa)
	proV	Glycine betaine/L-proline transport ATP-binding protein ProV. (392 aa)

Your Current Organism:

Pseudomonas fluorescens

NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gbuC_3	gbuC_4	SRM1_02652	SRM1_05325	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine/carnitine transport binding protein GbuC precursor.	0.839
gbuC_3	opuAA	SRM1_02652	SRM1_00416	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine transport ATP-binding protein OpuAA.	0.926
gbuC_3	opuAB_1	SRM1_02652	SRM1_00415	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine transport system permease protein OpuAB.	0.862
gbuC_3	opuAB_2	SRM1_02652	SRM1_05333	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine transport system permease protein OpuAB.	0.868
gbuC_3	opuAC_1	SRM1_02652	SRM1_01603	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine-binding protein OpuAC precursor.	0.540
gbuC_3	opuAC_2	SRM1_02652	SRM1_05332	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine-binding protein OpuAC precursor.	0.686
gbuC_3	proV	SRM1_02652	SRM1_05334	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine/L-proline transport ATP-binding protein ProV.	0.949
gbuC_4	gbuC_3	SRM1_05325	SRM1_02652	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine/carnitine transport binding protein GbuC precursor.	0.839
gbuC_4	opuAA	SRM1_05325	SRM1_00416	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine transport ATP-binding protein OpuAA.	0.922
gbuC_4	opuAB_1	SRM1_05325	SRM1_00415	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine transport system permease protein OpuAB.	0.933
gbuC_4	opuAB_2	SRM1_05325	SRM1_05333	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine transport system permease protein OpuAB.	0.942
gbuC_4	opuAC_1	SRM1_05325	SRM1_01603	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine-binding protein OpuAC precursor.	0.506
gbuC_4	opuAC_2	SRM1_05325	SRM1_05332	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine-binding protein OpuAC precursor.	0.906
gbuC_4	proV	SRM1_05325	SRM1_05334	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine/L-proline transport ATP-binding protein ProV.	0.952
gbuC_4	proX_1	SRM1_05325	SRM1_00414	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine-binding periplasmic protein precursor.	0.471
gbuC_4	proX_2	SRM1_05325	SRM1_03132	Glycine betaine/carnitine transport binding protein GbuC precursor.	Glycine betaine-binding periplasmic protein precursor.	0.474
opuAA	gbuC_3	SRM1_00416	SRM1_02652	Glycine betaine transport ATP-binding protein OpuAA.	Glycine betaine/carnitine transport binding protein GbuC precursor.	0.926
opuAA	gbuC_4	SRM1_00416	SRM1_05325	Glycine betaine transport ATP-binding protein OpuAA.	Glycine betaine/carnitine transport binding protein GbuC precursor.	0.922
opuAA	opuAB_1	SRM1_00416	SRM1_00415	Glycine betaine transport ATP-binding protein OpuAA.	Glycine betaine transport system permease protein OpuAB.	0.995
opuAA	opuAB_2	SRM1_00416	SRM1_05333	Glycine betaine transport ATP-binding protein OpuAA.	Glycine betaine transport system permease protein OpuAB.	0.980

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