STRINGSTRING
ssuC_5 ssuC_5 potH_4 potH_4 ydcV_5 ydcV_5 phnU phnU opuAB_2 opuAB_2 potH_3 potH_3 ydcV_4 ydcV_4 gltK gltK glnM_2 glnM_2 yejB_1 yejB_1 metP metP cysT cysT cysW_1 cysW_1 ssuC_1 ssuC_1 metI metI yecS_1 yecS_1 ssuC_2 ssuC_2 occM_1 occM_1 artQ_1 artQ_1 opuAB_1 opuAB_1 glnP_1 glnP_1 modB_1 modB_1 opuBB opuBB opuCD opuCD dppC dppC dppB dppB glnM_1 glnM_1 yhdY yhdY ydcV_1 ydcV_1 ydcU ydcU hisM hisM hisQ_1 hisQ_1 cysW_2 cysW_2 cysW_3 cysW_3 yejE_1 yejE_1 ugpA_2 ugpA_2 araQ araQ hisQ_2 hisQ_2 occM_2 occM_2 araP araP sugB_2 sugB_2 ydcV_3 ydcV_3 potH_2 potH_2 glnP_2 glnP_2 tcyB tcyB yejE_2 yejE_2 yejB_2 yejB_2 modB_2 modB_2 sugB_1 sugB_1 yecS_5 yecS_5 ugpA_1 ugpA_1 pstA pstA pstC pstC artQ_4 artQ_4 yecS_4 yecS_4 cysW_4 cysW_4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ssuC_5Putative aliphatic sulfonates transport permease protein SsuC. (260 aa)
potH_4Putrescine transport system permease protein PotH. (306 aa)
ydcV_5Inner membrane ABC transporter permease protein YdcV. (296 aa)
phnUPutative 2-aminoethylphosphonate transport system permease protein PhnU. (574 aa)
opuAB_2Glycine betaine transport system permease protein OpuAB. (281 aa)
potH_3Putrescine transport system permease protein PotH. (415 aa)
ydcV_4Inner membrane ABC transporter permease protein YdcV. (274 aa)
gltKGlutamate/aspartate transport system permease protein GltK. (223 aa)
glnM_2Putative glutamine ABC transporter permease protein GlnM. (248 aa)
yejB_1Inner membrane ABC transporter permease protein YejB. (357 aa)
metPMethionine import system permease protein MetP. (224 aa)
cysTSulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (272 aa)
cysW_1Sulfate transport system permease protein CysW. (290 aa)
ssuC_1Putative aliphatic sulfonates transport permease protein SsuC. (532 aa)
metID-methionine transport system permease protein MetI. (214 aa)
yecS_1Inner membrane amino-acid ABC transporter permease protein YecS. (221 aa)
ssuC_2Putative aliphatic sulfonates transport permease protein SsuC. (277 aa)
occM_1Octopine transport system permease protein OccM. (229 aa)
artQ_1Arginine ABC transporter permease protein ArtQ. (231 aa)
opuAB_1Glycine betaine transport system permease protein OpuAB. (283 aa)
glnP_1Glutamine transport system permease protein GlnP. (337 aa)
modB_1Molybdenum transport system permease protein ModB. (521 aa)
opuBBCholine transport system permease protein OpuBB. (217 aa)
opuCDCarnitine transport permease protein OpuCD. (238 aa)
dppCDipeptide transport system permease protein DppC. (307 aa)
dppBDipeptide transport system permease protein DppB. (336 aa)
glnM_1Putative glutamine ABC transporter permease protein GlnM. (393 aa)
yhdYInner membrane amino-acid ABC transporter permease protein YhdY. (365 aa)
ydcV_1Inner membrane ABC transporter permease protein YdcV. (269 aa)
ydcUInner membrane ABC transporter permease protein YdcU. (306 aa)
hisMHistidine transport system permease protein HisM. (236 aa)
hisQ_1Histidine transport system permease protein HisQ. (242 aa)
cysW_2Sulfate transport system permease protein CysW. (266 aa)
cysW_3Sulfate transport system permease protein CysW. (281 aa)
yejE_1Inner membrane ABC transporter permease protein YejE. (339 aa)
ugpA_2Sn-glycerol-3-phosphate transport system permease protein UgpA. (302 aa)
araQL-arabinose transport system permease protein AraQ. (281 aa)
hisQ_2Histidine transport system permease protein HisQ. (229 aa)
occM_2Octopine transport system permease protein OccM. (232 aa)
araPL-arabinose transport system permease protein AraP. (288 aa)
sugB_2Trehalose transport system permease protein SugB. (266 aa)
ydcV_3Inner membrane ABC transporter permease protein YdcV. (269 aa)
potH_2Putrescine transport system permease protein PotH. (315 aa)
glnP_2Glutamine transport system permease protein GlnP. (220 aa)
tcyBL-cystine transport system permease protein TcyB. (220 aa)
yejE_2Inner membrane ABC transporter permease protein YejE. (340 aa)
yejB_2Inner membrane ABC transporter permease protein YejB. (353 aa)
modB_2Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (226 aa)
sugB_1Trehalose transport system permease protein SugB. (276 aa)
yecS_5Inner membrane amino-acid ABC transporter permease protein YecS. (216 aa)
ugpA_1Sn-glycerol-3-phosphate transport system permease protein UgpA. (308 aa)
pstAPhosphate transport system permease protein PstA. (556 aa)
pstCPhosphate transport system permease protein PstC. (760 aa)
artQ_4Arginine transport system permease protein ArtQ. (278 aa)
yecS_4Inner membrane amino-acid ABC transporter permease protein YecS. (222 aa)
cysW_4Sulfate transport system permease protein CysW. (538 aa)
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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