(12 nodes) Pre-ATP-grasp domain superfamily network (Acinetobacter haemolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	purK	5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (373 aa)
	APR70359.1	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1201 aa)
	APR70340.1	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1201 aa)
	APR70322.1	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa)
	accC	acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (454 aa)
	APR70058.1	acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	carB	Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family. (1077 aa)
	APR69395.1	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (652 aa)
	ddl	D-alanine--D-alanine ligase; Cell wall formation. (295 aa)
	gshB	Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family. (314 aa)
	purD	Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family. (428 aa)
	purT	Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. (402 aa)

Your Current Organism:

Acinetobacter haemolyticus

NCBI taxonomy Id: 29430
Other names: A. haemolyticus, ATCC 17906, Achromobacter haemolyticus, Acinetobacter genomosp. 4, Acinetobacter genomospecies 4, Acinetobacter haematolyticus, CCUG 888, CIP 64.3, DSM 6962, LMG 996, LMG:996, NCCB 85026, NCTC 12155, NCTC:12155, strain B40, strain Mannheim 2446/60

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APR69395.1	APR70340.1	AHTJS_02685	AHTJS_08070	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
APR69395.1	APR70359.1	AHTJS_02685	AHTJS_08185	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
APR70058.1	APR70340.1	AHTJS_06490	AHTJS_08070	acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
APR70058.1	APR70359.1	AHTJS_06490	AHTJS_08185	acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
APR70058.1	accC	AHTJS_06490	AHTJS_07200	acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.918
APR70322.1	APR70340.1	AHTJS_07975	AHTJS_08070	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
APR70322.1	APR70359.1	AHTJS_07975	AHTJS_08185	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
APR70340.1	APR69395.1	AHTJS_08070	AHTJS_02685	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
APR70340.1	APR70058.1	AHTJS_08070	AHTJS_06490	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
APR70340.1	APR70322.1	AHTJS_08070	AHTJS_07975	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
APR70340.1	APR70359.1	AHTJS_08070	AHTJS_08185	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APR70340.1	accC	AHTJS_08070	AHTJS_07200	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.453
APR70359.1	APR69395.1	AHTJS_08185	AHTJS_02685	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
APR70359.1	APR70058.1	AHTJS_08185	AHTJS_06490	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
APR70359.1	APR70322.1	AHTJS_08185	AHTJS_07975	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
APR70359.1	APR70340.1	AHTJS_08185	AHTJS_08070	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APR70359.1	accC	AHTJS_08185	AHTJS_07200	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.626
accC	APR70058.1	AHTJS_07200	AHTJS_06490	acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
accC	APR70340.1	AHTJS_07200	AHTJS_08070	acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.453
accC	APR70359.1	AHTJS_07200	AHTJS_08185	acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626

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