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YLM1_0214 YLM1_0214 YLM1_0215 YLM1_0215 YLM1_0216 YLM1_0216 YLM1_0217 YLM1_0217 YLM1_0218 YLM1_0218 YLM1_0219 YLM1_0219 YLM1_0220 YLM1_0220 YLM1_0263 YLM1_0263 YLM1_0294 YLM1_0294 YLM1_0334 YLM1_0334 YLM1_0335 YLM1_0335 YLM1_0430 YLM1_0430 YLM1_0434 YLM1_0434 YLM1_0538 YLM1_0538 YLM1_0649 YLM1_0649 sucD sucD YLM1_0932 YLM1_0932 YLM1_0933 YLM1_0933 YLM1_0934 YLM1_0934 YLM1_0935 YLM1_0935 YLM1_0936 YLM1_0936 YLM1_1056 YLM1_1056 YLM1_1129 YLM1_1129 sucC sucC YLM1_1285 YLM1_1285 YLM1_1286 YLM1_1286 YLM1_1287 YLM1_1287 YLM1_1288 YLM1_1288 YLM1_1339 YLM1_1339 YLM1_1350 YLM1_1350 YLM1_1353 YLM1_1353 YLM1_1577 YLM1_1577 YLM1_1627 YLM1_1627
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YLM1_0214Pyruvate ferredoxin oxidoreductase gamma subunit PorC. (173 aa)
YLM1_0215Pyruvate ferredoxin oxidoreductase delta subunit PorD. (80 aa)
YLM1_0216Pyruvate ferredoxin oxidoreductase alpha subunit PorA. (382 aa)
YLM1_0217Pyruvate ferredoxin oxidoreductase beta subunit PorB. (288 aa)
YLM1_0218Pyruvate ferredoxin oxidoreductase-associated PorE. (166 aa)
YLM1_0219Pyruvate ferredoxin oxidoreductase-associated PorF. (142 aa)
YLM1_0220Fumarate hydratase FumA. (279 aa)
YLM1_0263N-carbamoyl-D-amino acid amidohydrolase AguB. (281 aa)
YLM1_0294Succinate dehydrogenase/fumarate reductase iron-sulfur protein SdhB. (503 aa)
YLM1_0334Fumarate hydratase FumA. (294 aa)
YLM1_03352-methylcitrate synthase/citrate synthase II PrpC/CitZ. (280 aa)
YLM1_0430Fumarate hydratase FumA. (183 aa)
YLM1_0434Pyruvate carboxylase subunit A PycA. (496 aa)
YLM1_05383-hydroxybutyryl-CoA dehydrogenase Hbd. (312 aa)
YLM1_0649Malate dehydrogenase Mdh; Belongs to the LDH/MDH superfamily. (318 aa)
sucDsuccinate-CoA ligase alpha subunit SucD; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (288 aa)
YLM1_0932Ketoisovalerate ferredoxin oxidoreductase beta subunit VorB. (498 aa)
YLM1_0933Ketoisovalerate ferredoxin oxidoreductase alpha subunit VorA. (388 aa)
YLM1_0934Ketoisovalerate ferredoxin oxidoreductase gamma subunit VorC. (84 aa)
YLM1_0935acetyl-CoA synthetase AcsA. (556 aa)
YLM1_0936Transcriptional regulator. (183 aa)
YLM1_1056ADP-dependent acetyl-CoA synthetase Acs. (699 aa)
YLM1_1129acetyl-CoA acetyltransferase. (386 aa)
sucCsuccinate-CoA synthetase beta subunit SucC; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (373 aa)
YLM1_12852-oxoglutarate ferredoxin oxidoreductase subunit gamma KorC. (181 aa)
YLM1_12862-oxoglutarate ferredoxin oxidoreductase subunit beta KorB. (287 aa)
YLM1_12872-oxoglutarate ferredoxin oxidoreductase subunit alpha KorA. (377 aa)
YLM1_12882-oxoglutarate ferredoxin oxidoreductase subunit delta KorD. (68 aa)
YLM1_1339Pyruvate carboxylase subunit B PycB. (576 aa)
YLM1_1350Fumarate hydratase FumA. (166 aa)
YLM1_1353Phosphoenolpyruvate synthase PpsA; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (757 aa)
YLM1_1577Succinate dehydrogenase/fumarate reductase flavoprotein subunit SdhA. (552 aa)
YLM1_1627Hypothetical protein. (132 aa)
Your Current Organism:
Methanobrevibacter olleyae
NCBI taxonomy Id: 294671
Other names: DSM 16632, M. olleyae, Methanobrevibacter olleyae Rea et al. 2007, Methanobrevibacter sp. KM1H5-1P, OCM 841, strain KM1H5-1P
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