STRINGSTRING
YLM1_0263 YLM1_0263 YLM1_1285 YLM1_1285 YLM1_1286 YLM1_1286 YLM1_1287 YLM1_1287 YLM1_1288 YLM1_1288
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YLM1_0263N-carbamoyl-D-amino acid amidohydrolase AguB. (281 aa)
YLM1_12852-oxoglutarate ferredoxin oxidoreductase subunit gamma KorC. (181 aa)
YLM1_12862-oxoglutarate ferredoxin oxidoreductase subunit beta KorB. (287 aa)
YLM1_12872-oxoglutarate ferredoxin oxidoreductase subunit alpha KorA. (377 aa)
YLM1_12882-oxoglutarate ferredoxin oxidoreductase subunit delta KorD. (68 aa)
Your Current Organism:
Methanobrevibacter olleyae
NCBI taxonomy Id: 294671
Other names: DSM 16632, M. olleyae, Methanobrevibacter olleyae Rea et al. 2007, Methanobrevibacter sp. KM1H5-1P, OCM 841, strain KM1H5-1P
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