(47 nodes) Cytosolic ribosome, and Zinc-binding ribosomal protein network (Meyerozyma guilliermondii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGUG_00328	S4 RNA-binding domain-containing protein. (465 aa)
	PGUG_00379	60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...] (310 aa)
	PGUG_00383	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (145 aa)
	PGUG_00657	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	PGUG_00719	Uncharacterized protein. (70 aa)
	PGUG_00989	60S ribosomal protein L33-A. (109 aa)
	PGUG_01007	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)
	PGUG_01171	60S ribosomal protein L10. (220 aa)
	PGUG_01465	60S ribosomal protein L17-B; Belongs to the universal ribosomal protein uL22 family. (184 aa)
	PGUG_01877	KH type-2 domain-containing protein. (238 aa)
	PGUG_01891	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (116 aa)
	PGUG_01938	40S ribosomal protein S29-A. (56 aa)
	PGUG_01951	Ribosomal_S10 domain-containing protein. (118 aa)
	PGUG_02028	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (188 aa)
	PGUG_02089	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (92 aa)
	PGUG_02251	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (144 aa)
	PGUG_02332	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
	PGUG_02539	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (389 aa)
	PGUG_02545	Ribos_L4_asso_C domain-containing protein. (362 aa)
	PGUG_02572	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (205 aa)
	PGUG_02591	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (105 aa)
	PGUG_02658	Uncharacterized protein. (191 aa)
	PGUG_02744	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (56 aa)
	PGUG_02797	Uncharacterized protein. (156 aa)
	PGUG_02798	60S ribosomal protein L30. (107 aa)
	PGUG_03309	Ribosomal protein L37; Binds to the 23S rRNA. (98 aa)
	PGUG_03484	40S ribosomal protein S27. (50 aa)
	PGUG_03619	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (224 aa)
	PGUG_03638	Ribosomal_L14e domain-containing protein. (134 aa)
	PGUG_03700	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
	PGUG_03816	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	PGUG_03990	60S ribosomal protein L11-A; Belongs to the universal ribosomal protein uL5 family. (174 aa)
	PGUG_04207	40S ribosomal protein S19-B. (173 aa)
	PGUG_04235	Uncharacterized protein. (178 aa)
	PGUG_04366	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
	PGUG_04367	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (115 aa)
	PGUG_04375	Ribosomal_L19e domain-containing protein. (165 aa)
	PGUG_04408	Uncharacterized protein. (122 aa)
	PGUG_04448	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	PGUG_04476	Ubiquitin. (151 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	PGUG_04739	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (202 aa)
	PGUG_04793	Ribosomal_L30 domain-containing protein. (271 aa)
	PGUG_05105	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (137 aa)
	PGUG_05417	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (224 aa)
	PGUG_05491	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	PGUG_05785	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (283 aa)

Your Current Organism:

Meyerozyma guilliermondii

NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PGUG_00328	PGUG_00379	A5DAM3	A5DAS4	S4 RNA-binding domain-containing protein.	60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...]	0.999
PGUG_00328	PGUG_00383	A5DAM3	A5DAS8	S4 RNA-binding domain-containing protein.	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.985
PGUG_00328	PGUG_00657	A5DAM3	A5DBK2	S4 RNA-binding domain-containing protein.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.999
PGUG_00328	PGUG_00719	A5DAM3	A5DBR4	S4 RNA-binding domain-containing protein.	Uncharacterized protein.	0.999
PGUG_00328	PGUG_00989	A5DAM3	A5DCI4	S4 RNA-binding domain-containing protein.	60S ribosomal protein L33-A.	0.999
PGUG_00328	PGUG_01007	A5DAM3	A5DCK2	S4 RNA-binding domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
PGUG_00328	PGUG_01171	A5DAM3	A5DD16	S4 RNA-binding domain-containing protein.	60S ribosomal protein L10.	0.999
PGUG_00328	PGUG_01465	A5DAM3	A5DDW4	S4 RNA-binding domain-containing protein.	60S ribosomal protein L17-B; Belongs to the universal ribosomal protein uL22 family.	0.999
PGUG_00328	PGUG_01877	A5DAM3	A5DF26	S4 RNA-binding domain-containing protein.	KH type-2 domain-containing protein.	0.999
PGUG_00328	PGUG_01891	A5DAM3	A5DF40	S4 RNA-binding domain-containing protein.	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family.	0.999
PGUG_00328	PGUG_01938	A5DAM3	A5DF87	S4 RNA-binding domain-containing protein.	40S ribosomal protein S29-A.	0.999
PGUG_00328	PGUG_01951	A5DAM3	A5DFA0	S4 RNA-binding domain-containing protein.	Ribosomal_S10 domain-containing protein.	0.999
PGUG_00328	PGUG_02028	A5DAM3	A5DFH7	S4 RNA-binding domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
PGUG_00328	PGUG_02089	A5DAM3	A5DFN8	S4 RNA-binding domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
PGUG_00328	PGUG_02251	A5DAM3	A5DG50	S4 RNA-binding domain-containing protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.999
PGUG_00328	PGUG_02332	A5DAM3	A5DGD1	S4 RNA-binding domain-containing protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
PGUG_00328	PGUG_02539	A5DAM3	A5DGY8	S4 RNA-binding domain-containing protein.	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.999
PGUG_00328	PGUG_02545	A5DAM3	A5DGZ4	S4 RNA-binding domain-containing protein.	Ribos_L4_asso_C domain-containing protein.	0.999
PGUG_00328	PGUG_02572	A5DAM3	A5DH21	S4 RNA-binding domain-containing protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
PGUG_00328	PGUG_02591	A5DAM3	A5DH40	S4 RNA-binding domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999