(24 nodes) Transport of the SLBP independent Mature mRNA, and Nuclear Envelope Breakdown network (Meyerozyma guilliermondii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGUG_00176	Uncharacterized protein. (969 aa)
	PGUG_00277	Uncharacterized protein. (471 aa)
	DBP5	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity). (482 aa)
	PGUG_00868	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (741 aa)
	PGUG_00959	Peptidase S59 domain-containing protein. (1068 aa)
	PGUG_01030	Peptidase S59 domain-containing protein. (1239 aa)
	PGUG_01046	Uncharacterized protein. (494 aa)
	PGUG_01186	NUP214 domain-containing protein. (1179 aa)
	PGUG_01229	Uncharacterized protein. (1838 aa)
	PGUG_01235	Uncharacterized protein. (342 aa)
	PGUG_01236	TPR_MLP1_2 domain-containing protein. (1375 aa)
	PGUG_01449	RanBD1 domain-containing protein. (396 aa)
	PGUG_01572	Uncharacterized protein. (1422 aa)
	PGUG_02592	RanBD1 domain-containing protein. (672 aa)
	SEC13	Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...] (290 aa)
	PGUG_03508	Uncharacterized protein. (367 aa)
	PGUG_03726	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (345 aa)
	PGUG_03821	Uncharacterized protein. (577 aa)
	PGUG_04037	Nup188_C domain-containing protein. (1625 aa)
	PGUG_04537	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (768 aa)
	PGUG_04969	Nuclear pore protein. (972 aa)
	PGUG_05028	Nsp1_C domain-containing protein. (200 aa)
	PGUG_05336	Uncharacterized protein. (1122 aa)
	PGUG_05444	Nup54 domain-containing protein. (579 aa)

Your Current Organism:

Meyerozyma guilliermondii

NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DBP5	PGUG_00277	A5DBI5	A5DAH2	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.974
DBP5	PGUG_01186	A5DBI5	A5DD31	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	NUP214 domain-containing protein.	0.992
DBP5	PGUG_03508	A5DBI5	A5DJQ7	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.547
DBP5	PGUG_03821	A5DBI5	A5DKM0	ATP-dependent RNA helicase DBP5; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity).	Uncharacterized protein.	0.719
PGUG_00176	PGUG_00277	A5DA71	A5DAH2	Uncharacterized protein.	Uncharacterized protein.	0.999
PGUG_00176	PGUG_00868	A5DA71	A5DC63	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
PGUG_00176	PGUG_00959	A5DA71	A5DCF4	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.999
PGUG_00176	PGUG_01030	A5DA71	A5DCM5	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.999
PGUG_00176	PGUG_01046	A5DA71	A5DCP1	Uncharacterized protein.	Uncharacterized protein.	0.999
PGUG_00176	PGUG_01186	A5DA71	A5DD31	Uncharacterized protein.	NUP214 domain-containing protein.	0.999
PGUG_00176	PGUG_01229	A5DA71	A5DD78	Uncharacterized protein.	Uncharacterized protein.	0.999
PGUG_00176	PGUG_01235	A5DA71	A5DD84	Uncharacterized protein.	Uncharacterized protein.	0.992
PGUG_00176	PGUG_01236	A5DA71	A5DD85	Uncharacterized protein.	TPR_MLP1_2 domain-containing protein.	0.992
PGUG_00176	PGUG_01449	A5DA71	A5DDU8	Uncharacterized protein.	RanBD1 domain-containing protein.	0.997
PGUG_00176	PGUG_01572	A5DA71	A5DE71	Uncharacterized protein.	Uncharacterized protein.	0.999
PGUG_00176	PGUG_02592	A5DA71	A5DH41	Uncharacterized protein.	RanBD1 domain-containing protein.	0.999
PGUG_00176	PGUG_03508	A5DA71	A5DJQ7	Uncharacterized protein.	Uncharacterized protein.	0.999
PGUG_00176	PGUG_03726	A5DA71	A5DKC5	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.999
PGUG_00176	PGUG_03821	A5DA71	A5DKM0	Uncharacterized protein.	Uncharacterized protein.	0.999
PGUG_00176	PGUG_04037	A5DA71	A5DL86	Uncharacterized protein.	Nup188_C domain-containing protein.	0.993