(8 nodes) COP9 signalosome, and Cul4-RING E3 ubiquitin ligase complex network (Meyerozyma guilliermondii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGUG_00362	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (573 aa)
	PGUG_00690	WD_REPEATS_REGION domain-containing protein. (420 aa)
	PGUG_00869	Uncharacterized protein. (1130 aa)
	PGUG_01782	F-box domain-containing protein. (608 aa)
	PGUG_04159	CULLIN_2 domain-containing protein; Belongs to the cullin family. (749 aa)
	PGUG_04468	Uncharacterized protein. (174 aa)
	PGUG_04850	MPN domain-containing protein. (393 aa)
	PGUG_04925	Uncharacterized protein. (294 aa)

Your Current Organism:

Meyerozyma guilliermondii

NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PGUG_00362	PGUG_00690	A5DAQ7	A5DBN5	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	WD_REPEATS_REGION domain-containing protein.	0.741
PGUG_00362	PGUG_00869	A5DAQ7	A5DC64	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	Uncharacterized protein.	0.982
PGUG_00362	PGUG_01782	A5DAQ7	A5DET1	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	F-box domain-containing protein.	0.760
PGUG_00362	PGUG_04159	A5DAQ7	A5DLK8	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.917
PGUG_00362	PGUG_04468	A5DAQ7	A5DMG7	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	Uncharacterized protein.	0.726
PGUG_00362	PGUG_04850	A5DAQ7	A5DNJ9	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	MPN domain-containing protein.	0.789
PGUG_00362	PGUG_04925	A5DAQ7	A5DNS4	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	Uncharacterized protein.	0.630
PGUG_00690	PGUG_00362	A5DBN5	A5DAQ7	WD_REPEATS_REGION domain-containing protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.741
PGUG_00690	PGUG_00869	A5DBN5	A5DC64	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
PGUG_00690	PGUG_01782	A5DBN5	A5DET1	WD_REPEATS_REGION domain-containing protein.	F-box domain-containing protein.	0.675
PGUG_00690	PGUG_04159	A5DBN5	A5DLK8	WD_REPEATS_REGION domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.943
PGUG_00690	PGUG_04468	A5DBN5	A5DMG7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.658
PGUG_00690	PGUG_04850	A5DBN5	A5DNJ9	WD_REPEATS_REGION domain-containing protein.	MPN domain-containing protein.	0.759
PGUG_00690	PGUG_04925	A5DBN5	A5DNS4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.652
PGUG_00869	PGUG_00362	A5DC64	A5DAQ7	Uncharacterized protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.982
PGUG_00869	PGUG_00690	A5DC64	A5DBN5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
PGUG_00869	PGUG_01782	A5DC64	A5DET1	Uncharacterized protein.	F-box domain-containing protein.	0.818
PGUG_00869	PGUG_04159	A5DC64	A5DLK8	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
PGUG_00869	PGUG_04468	A5DC64	A5DMG7	Uncharacterized protein.	Uncharacterized protein.	0.703
PGUG_00869	PGUG_04850	A5DC64	A5DNJ9	Uncharacterized protein.	MPN domain-containing protein.	0.914