STRINGSTRING
PGUG_02831 PGUG_02831 RPB1 RPB1 PGUG_01107 PGUG_01107 PGUG_00916 PGUG_00916 PGUG_00445 PGUG_00445 PGUG_02765 PGUG_02765 PGUG_02490 PGUG_02490 PGUG_02408 PGUG_02408 PGUG_02226 PGUG_02226 PGUG_02088 PGUG_02088 PGUG_01872 PGUG_01872 PGUG_01460 PGUG_01460 PGUG_05851 PGUG_05851 PGUG_05450 PGUG_05450 PGUG_05425 PGUG_05425 PGUG_05395 PGUG_05395 PGUG_05130 PGUG_05130 PGUG_04989 PGUG_04989 PGUG_04943 PGUG_04943 PGUG_00134 PGUG_00134 PGUG_00236 PGUG_00236 PGUG_04942 PGUG_04942 PGUG_04303 PGUG_04303 PGUG_04108 PGUG_04108 PGUG_04095 PGUG_04095 PGUG_04052 PGUG_04052 PGUG_03796 PGUG_03796 PGUG_03680 PGUG_03680 PGUG_03221 PGUG_03221 PGUG_03049 PGUG_03049 RPB2 RPB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGUG_02831Uncharacterized protein. (173 aa)
RPB1DNA-directed RNA polymerase II subunit RPB1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB1 is part of the core element with the central large cl [...] (1579 aa)
PGUG_01107DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (288 aa)
PGUG_00916MIF4G domain-containing protein. (929 aa)
PGUG_00445DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (112 aa)
PGUG_02765DNA-directed RNA polymerases II 24 kDa polypeptide. (179 aa)
PGUG_02490Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)
PGUG_02408Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
PGUG_02226RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (732 aa)
PGUG_02088Uncharacterized protein. (380 aa)
PGUG_01872DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
PGUG_01460RPOL4c domain-containing protein. (188 aa)
PGUG_05851Uncharacterized protein. (69 aa)
PGUG_05450Uncharacterized protein. (840 aa)
PGUG_05425Uncharacterized protein. (158 aa)
PGUG_05395RPOLD domain-containing protein. (305 aa)
PGUG_05130Nuclear cap-binding protein subunit 2. (198 aa)
PGUG_04989Uncharacterized protein. (73 aa)
PGUG_04943Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (963 aa)
PGUG_00134BSD domain-containing protein. (620 aa)
PGUG_00236Uncharacterized protein. (676 aa)
PGUG_04942General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (488 aa)
PGUG_04303Helicase ATP-binding domain-containing protein. (843 aa)
PGUG_04108CYCLIN domain-containing protein; Belongs to the cyclin family. (385 aa)
PGUG_04095RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (498 aa)
PGUG_04052Uncharacterized protein. (72 aa)
PGUG_03796Uncharacterized protein. (378 aa)
PGUG_03680RING-type domain-containing protein. (321 aa)
PGUG_03221Uncharacterized protein. (394 aa)
PGUG_03049Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (112 aa)
RPB2DNA-directed RNA polymerase II subunit RPB2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is [...] (1236 aa)
Your Current Organism:
Meyerozyma guilliermondii
NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260
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