12 items (Meyerozyma guilliermondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGUG_00115	Glyco_hydro_3 domain-containing protein. (205 aa)
	PGUG_02293	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (559 aa)
	PGUG_02603	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (469 aa)
	PGUG_02874	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (858 aa)
	PGUG_02896	Uncharacterized protein; Belongs to the asparaginase 1 family. (394 aa)
	PGUG_03916	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (824 aa)
	PGUG_04562	Uncharacterized protein. (581 aa)
	PGUG_04722	Uncharacterized protein. (472 aa)
	PGUG_04844	CN hydrolase domain-containing protein. (259 aa)
	PGUG_04845	Nitrilase; Nitrilase that hydrolyzes preferentially 4-cyanopyridine. Is also able to hydrolyze some aliphatic nitriles, such as phenylacetonitrile; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. (317 aa)
	PGUG_05161	Uncharacterized protein. (426 aa)
	PGUG_05611	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (484 aa)

Your Current Organism:

Meyerozyma guilliermondii

NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PGUG_00115	PGUG_02293	A5DA10	A5DG92	Glyco_hydro_3 domain-containing protein.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.912
PGUG_00115	PGUG_02874	A5DA10	A5DHX3	Glyco_hydro_3 domain-containing protein.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.912
PGUG_00115	PGUG_03916	A5DA10	A5DKW5	Glyco_hydro_3 domain-containing protein.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.911
PGUG_02293	PGUG_00115	A5DG92	A5DA10	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Glyco_hydro_3 domain-containing protein.	0.912
PGUG_02293	PGUG_02874	A5DG92	A5DHX3	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.902
PGUG_02293	PGUG_03916	A5DG92	A5DKW5	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.901
PGUG_02603	PGUG_05611	A5DH52	A5DQR0	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.936
PGUG_02874	PGUG_00115	A5DHX3	A5DA10	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Glyco_hydro_3 domain-containing protein.	0.912
PGUG_02874	PGUG_02293	A5DHX3	A5DG92	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.902
PGUG_02874	PGUG_03916	A5DHX3	A5DKW5	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.902
PGUG_02896	PGUG_04844	A5DHZ5	A5DNJ3	Uncharacterized protein; Belongs to the asparaginase 1 family.	CN hydrolase domain-containing protein.	0.800
PGUG_02896	PGUG_04845	A5DHZ5	A5DNJ4	Uncharacterized protein; Belongs to the asparaginase 1 family.	Nitrilase; Nitrilase that hydrolyzes preferentially 4-cyanopyridine. Is also able to hydrolyze some aliphatic nitriles, such as phenylacetonitrile; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family.	0.810
PGUG_03916	PGUG_00115	A5DKW5	A5DA10	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Glyco_hydro_3 domain-containing protein.	0.911
PGUG_03916	PGUG_02293	A5DKW5	A5DG92	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.901
PGUG_03916	PGUG_02874	A5DKW5	A5DHX3	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.902
PGUG_04562	PGUG_04722	A5DMR1	A5DN71	Uncharacterized protein.	Uncharacterized protein.	0.919
PGUG_04722	PGUG_04562	A5DN71	A5DMR1	Uncharacterized protein.	Uncharacterized protein.	0.919
PGUG_04844	PGUG_02896	A5DNJ3	A5DHZ5	CN hydrolase domain-containing protein.	Uncharacterized protein; Belongs to the asparaginase 1 family.	0.800
PGUG_04844	PGUG_04845	A5DNJ3	A5DNJ4	CN hydrolase domain-containing protein.	Nitrilase; Nitrilase that hydrolyzes preferentially 4-cyanopyridine. Is also able to hydrolyze some aliphatic nitriles, such as phenylacetonitrile; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family.	0.900
PGUG_04844	PGUG_05161	A5DNJ3	A5DPG0	CN hydrolase domain-containing protein.	Uncharacterized protein.	0.900