(33 nodes) Mixed, incl. Ino80 complex, and ATP-dependent chromatin remodeler activity network (Cryptococcus gattii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CNBG_0382	RING-type domain-containing protein. (472 aa)
	CNBG_1455	Uncharacterized protein. (598 aa)
	CNBG_0992	Uncharacterized protein. (496 aa)
	CNBG_2700	Zinc-finger protein. (463 aa)
	CNBG_3155	Chromo domain-containing protein. (275 aa)
	CNBG_2497	HTH APSES-type domain-containing protein. (1395 aa)
	CNBG_2612	Chromodomain-helicase-DNA-binding protein 1. (1504 aa)
	CNBG_2977	Helicase. (933 aa)
	CNBG_4345	Ino eighty subunit 2. (361 aa)
	CNBG_4460	Specific RNA polymerase II transcription factor. (653 aa)
	CNBG_4703	Uncharacterized protein. (1020 aa)
	CNBG_4828	Uncharacterized protein. (643 aa)
	CNBG_5240	Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family. (416 aa)
	CNBG_5703	Histone deacetylase 1/2. (622 aa)
	CNBG_5751	Histone H2A; Belongs to the histone H2A family. (138 aa)
	CNBG_0299	INO80 complex subunit C. (247 aa)
	CNBG_0594	Uncharacterized protein. (456 aa)
	CNBG_4434	RNA polymerase II transcription factor. (665 aa)
	CNBG_5264	Nonhistone protein 6. (225 aa)
	CNBG_5429	Brg1-associated factor b; Belongs to the actin family. (477 aa)
	CNBG_5999	DNA repair protein RAD5. (1359 aa)
	CNBG_0126	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (634 aa)
	CNBG_0486	Specific RNA polymerase II transcription factor. (513 aa)
	CNBG_3091	BAG domain-containing protein. (653 aa)
	CNBG_3096	Uncharacterized protein; Belongs to the actin family. (724 aa)
	CNBG_3156	DNA repair protein Rad8. (1919 aa)
	CNBG_4321	Transcription activator snf2l1. (1103 aa)
	CNBG_5886	DNA helicase INO80. (1810 aa)
	CNBG_9069	Pol II transcription elongation factor. (893 aa)
	CNBG_9090	Uncharacterized protein. (1035 aa)
	CNBG_9070	Chromodomain-helicase-DNA-binding protein 3. (705 aa)
	CNBG_9082	Uncharacterized protein. (276 aa)
	CNBG_9058	Uncharacterized protein. (1116 aa)

Your Current Organism:

Cryptococcus gattii

NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNBG_0126	CNBG_0299	A0A095E9L5	A0A095CYP7	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	INO80 complex subunit C.	0.988
CNBG_0126	CNBG_0382	A0A095E9L5	A0A095C410	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	RING-type domain-containing protein.	0.723
CNBG_0126	CNBG_0486	A0A095E9L5	A0A095EAU8	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Specific RNA polymerase II transcription factor.	0.650
CNBG_0126	CNBG_0594	A0A095E9L5	A0A095CZR3	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Uncharacterized protein.	0.650
CNBG_0126	CNBG_1455	A0A095E9L5	A0A095C4Y1	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Uncharacterized protein.	0.588
CNBG_0126	CNBG_2612	A0A095E9L5	A0A095CAZ1	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Chromodomain-helicase-DNA-binding protein 1.	0.477
CNBG_0126	CNBG_2700	A0A095E9L5	A0A095C8N7	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Zinc-finger protein.	0.681
CNBG_0126	CNBG_2977	A0A095E9L5	A0A095CC79	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Helicase.	0.474
CNBG_0126	CNBG_3091	A0A095E9L5	A0A095EJ27	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	BAG domain-containing protein.	0.588
CNBG_0126	CNBG_3096	A0A095E9L5	A0A095EJ32	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.989
CNBG_0126	CNBG_3155	A0A095E9L5	A0A095CA46	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Chromo domain-containing protein.	0.723
CNBG_0126	CNBG_3156	A0A095E9L5	A0A095EJ93	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	DNA repair protein Rad8.	0.723
CNBG_0126	CNBG_4321	A0A095E9L5	A0A095EN63	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Transcription activator snf2l1.	0.474
CNBG_0126	CNBG_4345	A0A095E9L5	A0A095CE28	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Ino eighty subunit 2.	0.810
CNBG_0126	CNBG_4434	A0A095E9L5	A0A095DCM1	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	RNA polymerase II transcription factor.	0.650
CNBG_0126	CNBG_4460	A0A095E9L5	A0A095CEH4	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Specific RNA polymerase II transcription factor.	0.650
CNBG_0126	CNBG_4828	A0A095E9L5	A0A095CEZ1	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Uncharacterized protein.	0.723
CNBG_0126	CNBG_5264	A0A095E9L5	A0A095DF59	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Nonhistone protein 6.	0.865
CNBG_0126	CNBG_5429	A0A095E9L5	A0A095DFY4	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Brg1-associated factor b; Belongs to the actin family.	0.995
CNBG_0126	CNBG_5751	A0A095E9L5	A0A095CI16	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	Histone H2A; Belongs to the histone H2A family.	0.463

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