STRINGSTRING
CNBG_0038 CNBG_0038 CNBG_0133 CNBG_0133 CNBG_0233 CNBG_0233 CNBG_0243 CNBG_0243 CNBG_0040 CNBG_0040 CNBG_0760 CNBG_0760 CNBG_1348 CNBG_1348 CNBG_1760 CNBG_1760 CNBG_1953 CNBG_1953 CNBG_2063 CNBG_2063 CNBG_2093 CNBG_2093 CNBG_2168 CNBG_2168 CNBG_1287 CNBG_1287 CNBG_2323 CNBG_2323 CNBG_1307 CNBG_1307 CNBG_2405 CNBG_2405 CNBG_1642 CNBG_1642 CNBG_2668 CNBG_2668 CNBG_2645 CNBG_2645 CNBG_2840 CNBG_2840 CNBG_3098 CNBG_3098 CNBG_3265 CNBG_3265 CNBG_2527 CNBG_2527 CNBG_3335 CNBG_3335 CNBG_2557 CNBG_2557 CNBG_2822 CNBG_2822 CNBG_2917 CNBG_2917 CNBG_4217 CNBG_4217 CNBG_3852 CNBG_3852 CNBG_3819 CNBG_3819 CNBG_4323 CNBG_4323 CNBG_3427 CNBG_3427 CNBG_3572 CNBG_3572 CNBG_3597 CNBG_3597 CNBG_3657 CNBG_3657 CNBG_4410 CNBG_4410 CNBG_4415 CNBG_4415 CNBG_4630 CNBG_4630 CNBG_4745 CNBG_4745 CNBG_4231 CNBG_4231 CNBG_3721 CNBG_3721 CNBG_5078 CNBG_5078 CNBG_5015 CNBG_5015 CNBG_4342 CNBG_4342 CNBG_5373 CNBG_5373 CNBG_4427 CNBG_4427 CNBG_5448 CNBG_5448 CNBG_5310 CNBG_5310 CNBG_5518 CNBG_5518 CNBG_4572 CNBG_4572 CNBG_4587 CNBG_4587 CNBG_5177 CNBG_5177 CNBG_6115 CNBG_6115 CNBG_6145 CNBG_6145 CNBG_6180 CNBG_6180 CNBG_5697 CNBG_5697 CNBG_6102 CNBG_6102 CNBG_0749 CNBG_0749 CNBG_0864 CNBG_0864 CNBG_0924 CNBG_0924 CNBG_1314 CNBG_1314 CNBG_1614 CNBG_1614 CNBG_1924 CNBG_1924 CNBG_2009 CNBG_2009 CNBG_2764 CNBG_2764 CNBG_2794 CNBG_2794 CNBG_2974 CNBG_2974 CNBG_3169 CNBG_3169 CNBG_3349 CNBG_3349 CNBG_3424 CNBG_3424 CNBG_4003 CNBG_4003 CNBG_4324 CNBG_4324 CNBG_4649 CNBG_4649 CNBG_5064 CNBG_5064 CNBG_5174 CNBG_5174 CNBG_5974 CNBG_5974 CNBG_5994 CNBG_5994 CNBG_6134 CNBG_6134 CNBG_1141 CNBG_1141 CNBG_1646 CNBG_1646 CNBG_1686 CNBG_1686 CNBG_1856 CNBG_1856 CNBG_2446 CNBG_2446 CNBG_2571 CNBG_2571 CNBG_2681 CNBG_2681 CNBG_3141 CNBG_3141 CNBG_3381 CNBG_3381 CNBG_5561 CNBG_5561 CNBG_5749 CNBG_5749 CNBG_9119 CNBG_9119 CNBG_9306 CNBG_9306 CNBG_9165 CNBG_9165 CNBG_9192 CNBG_9192 CNBG_9183 CNBG_9183 CNBG_9305 CNBG_9305 CNBG_9115 CNBG_9115 CNBG_9065 CNBG_9065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_0038DNA-directed RNA polymerase I subunit RPA49. (427 aa)
CNBG_0133DNA-directed RNA polymerase II subunit RPB11. (162 aa)
CNBG_0233Uncharacterized protein. (371 aa)
CNBG_0243Transcription factor TFIIIB component b. (527 aa)
CNBG_0040DNA-directed RNA polymerase I and III subunit RPAC2. (155 aa)
CNBG_0760DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1726 aa)
CNBG_1348DNA excision repair protein ERCC-2. (799 aa)
CNBG_1760Transcription initiation factor TFIIB. (376 aa)
CNBG_1953DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1192 aa)
CNBG_2063Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (126 aa)
CNBG_2093DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
CNBG_2168Uncharacterized protein. (595 aa)
CNBG_1287Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1152 aa)
CNBG_2323Transcription initiation factor TFIID subunit 2. (1729 aa)
CNBG_1307DNA-directed RNA polymerase III subunit RPC5. (375 aa)
CNBG_2405TFIID_20kDa domain-containing protein. (501 aa)
CNBG_1642Transcription factor IIIB 90 kDa subunit. (667 aa)
CNBG_2668General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (438 aa)
CNBG_2645Cyclin H; Belongs to the cyclin family. (447 aa)
CNBG_2840Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (113 aa)
CNBG_3098Nitroreductase. (210 aa)
CNBG_3265FACT complex subunit SPT16. (1035 aa)
CNBG_2527CTK3_C domain-containing protein. (149 aa)
CNBG_3335DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
CNBG_2557DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1129 aa)
CNBG_2822Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase. (615 aa)
CNBG_2917RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (910 aa)
CNBG_4217DNA-directed RNA polymerase III subunit RPC4. (457 aa)
CNBG_3852RNA polymerase-associated protein LEO1. (468 aa)
CNBG_3819CTD kinase subunit beta. (380 aa)
CNBG_4323Uncharacterized protein. (462 aa)
CNBG_3427Transcription initiation factor TFIID subunit 11. (173 aa)
CNBG_3572Transcription initiation factor TFIID subunit 1. (1070 aa)
CNBG_3597Transcription factor IWS1. (475 aa)
CNBG_3657Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (765 aa)
CNBG_4410Elongin-A. (442 aa)
CNBG_4415TATA-box-binding protein. (232 aa)
CNBG_4630Uncharacterized protein. (465 aa)
CNBG_4745Transcription initiation factor TFIIH subunit 3. (370 aa)
CNBG_4231Transcription initiation factor TFIID subunit 6. (522 aa)
CNBG_3721Isochorismatase domain-containing protein. (217 aa)
CNBG_5078Transcription initiation factor TFIIA large subunit. (210 aa)
CNBG_5015CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (358 aa)
CNBG_4342FCP1 homology domain-containing protein. (514 aa)
CNBG_5373RNA polymerase II-associated factor 1. (440 aa)
CNBG_4427Transcription initiation factor TFIID subunit 5. (696 aa)
CNBG_5448Chromosome transmission fidelity protein 1. (889 aa)
CNBG_5310DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
CNBG_5518Transcription elongation factor SPT6. (1506 aa)
CNBG_4572Uncharacterized protein. (236 aa)
CNBG_4587Transcription initiation factor TFIIF subunit beta. (334 aa)
CNBG_5177RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (572 aa)
CNBG_6115DNA-directed RNA polymerase I, II, and III subunit rpabc5. (69 aa)
CNBG_6145FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (586 aa)
CNBG_6180Uncharacterized protein. (251 aa)
CNBG_5697Transcription initiation factor TFIIE subunit beta. (295 aa)
CNBG_6102RPOL4c domain-containing protein. (242 aa)
CNBG_0749DNA-directed RNA polymerase I and III subunit RPAC1. (350 aa)
CNBG_0864Uncharacterized protein. (434 aa)
CNBG_0924DNA-directed RNA polymerase II subunit RPB7. (172 aa)
CNBG_1314DNA excision repair protein ERCC-3. (866 aa)
CNBG_1614DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1466 aa)
CNBG_1924DNA-directed RNA polymerase III subunit RPC6. (558 aa)
CNBG_2009Non-histone chromosomal protein 6. (141 aa)
CNBG_2764DNA-directed RNA polymerase I, II, and III subunit RPABC3. (163 aa)
CNBG_2794BTB domain-containing protein. (486 aa)
CNBG_2974Transcription initiation factor TFIID subunit 10. (303 aa)
CNBG_3169DUF4211 domain-containing protein. (409 aa)
CNBG_3349Transcription initiation factor TFIIH subunit 1. (641 aa)
CNBG_3424Transcription initiation factor TFIIE subunit alpha. (416 aa)
CNBG_4003Parafibromin. (435 aa)
CNBG_4324CMGC/CDK protein kinase. (1017 aa)
CNBG_4649Uncharacterized protein. (362 aa)
CNBG_5064RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (442 aa)
CNBG_5174DNA-directed RNA polymerase II subunit RPB3. (377 aa)
CNBG_5974Uncharacterized protein. (268 aa)
CNBG_5994DNA-directed RNA polymerase III subunit RPC8. (198 aa)
CNBG_6134RNA polymerase-associated protein CTR9. (1186 aa)
CNBG_1141DNA-directed RNA polymerase I, II, and III subunit RPABC1. (210 aa)
CNBG_1646Cyclin N-terminal domain-containing protein. (389 aa)
CNBG_1686Transcription elongation factor S-II. (332 aa)
CNBG_1856MARVEL domain-containing protein. (364 aa)
CNBG_2446Serine/threonine protein kinase. (474 aa)
CNBG_2571GCR1_C domain-containing protein. (380 aa)
CNBG_2681DNA-directed RNA polymerase I, II, and III subunit RPABC2. (149 aa)
CNBG_3141DNA-directed RNA polymerase I subunit RPA43. (359 aa)
CNBG_3381Uncharacterized protein. (718 aa)
CNBG_5561Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (156 aa)
CNBG_5749Uncharacterized protein. (343 aa)
CNBG_9119Transcription initiation factor TFIID subunit 7. (744 aa)
CNBG_9306CMGC/CDK/CRK7 protein kinase. (257 aa)
CNBG_9165CDK-activating kinase assembly factor MAT1. (373 aa)
CNBG_9192Uncharacterized protein. (124 aa)
CNBG_9183Uncharacterized protein. (83 aa)
CNBG_9305CMGC/CDK/CRK7 protein kinase. (852 aa)
CNBG_9115TFIIH basal transcription factor complex TTD-A subunit. (78 aa)
CNBG_9065DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1187 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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