STRINGSTRING
CNBG_1348 CNBG_1348 CNBG_1760 CNBG_1760 CNBG_2063 CNBG_2063 CNBG_2668 CNBG_2668 CNBG_2645 CNBG_2645 CNBG_3657 CNBG_3657 CNBG_4415 CNBG_4415 CNBG_4745 CNBG_4745 CNBG_5078 CNBG_5078 CNBG_5015 CNBG_5015 CNBG_4587 CNBG_4587 CNBG_5697 CNBG_5697 CNBG_1314 CNBG_1314 CNBG_3349 CNBG_3349 CNBG_3424 CNBG_3424 CNBG_5064 CNBG_5064 CNBG_9165 CNBG_9165 CNBG_9115 CNBG_9115
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_1348DNA excision repair protein ERCC-2. (799 aa)
CNBG_1760Transcription initiation factor TFIIB. (376 aa)
CNBG_2063Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (126 aa)
CNBG_2668General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (438 aa)
CNBG_2645Cyclin H; Belongs to the cyclin family. (447 aa)
CNBG_3657Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (765 aa)
CNBG_4415TATA-box-binding protein. (232 aa)
CNBG_4745Transcription initiation factor TFIIH subunit 3. (370 aa)
CNBG_5078Transcription initiation factor TFIIA large subunit. (210 aa)
CNBG_5015CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (358 aa)
CNBG_4587Transcription initiation factor TFIIF subunit beta. (334 aa)
CNBG_5697Transcription initiation factor TFIIE subunit beta. (295 aa)
CNBG_1314DNA excision repair protein ERCC-3. (866 aa)
CNBG_3349Transcription initiation factor TFIIH subunit 1. (641 aa)
CNBG_3424Transcription initiation factor TFIIE subunit alpha. (416 aa)
CNBG_5064RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (442 aa)
CNBG_9165CDK-activating kinase assembly factor MAT1. (373 aa)
CNBG_9115TFIIH basal transcription factor complex TTD-A subunit. (78 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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