(15 nodes) Transcription elongation factor complex, and RNA polymerase II, core complex network (Cryptococcus gattii)

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Your Input:
	CNBG_0133	DNA-directed RNA polymerase II subunit RPB11. (162 aa)
	CNBG_1287	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1152 aa)
	CNBG_2840	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (113 aa)
	CNBG_3265	FACT complex subunit SPT16. (1035 aa)
	CNBG_3852	RNA polymerase-associated protein LEO1. (468 aa)
	CNBG_5373	RNA polymerase II-associated factor 1. (440 aa)
	CNBG_5310	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
	CNBG_6145	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (586 aa)
	CNBG_0924	DNA-directed RNA polymerase II subunit RPB7. (172 aa)
	CNBG_4003	Parafibromin. (435 aa)
	CNBG_5174	DNA-directed RNA polymerase II subunit RPB3. (377 aa)
	CNBG_6134	RNA polymerase-associated protein CTR9. (1186 aa)
	CNBG_5749	Uncharacterized protein. (343 aa)
	CNBG_9192	Uncharacterized protein. (124 aa)
	CNBG_9065	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1187 aa)

Your Current Organism:

Cryptococcus gattii

NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNBG_0133	CNBG_0924	A0A095BZT5	A0A095D0X3	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase II subunit RPB7.	0.999
CNBG_0133	CNBG_1287	A0A095BZT5	A0A095C6Y4	DNA-directed RNA polymerase II subunit RPB11.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.994
CNBG_0133	CNBG_2840	A0A095BZT5	A0A095C921	DNA-directed RNA polymerase II subunit RPB11.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.991
CNBG_0133	CNBG_3265	A0A095BZT5	A0A095CAG3	DNA-directed RNA polymerase II subunit RPB11.	FACT complex subunit SPT16.	0.965
CNBG_0133	CNBG_3852	A0A095BZT5	A0A095CCP3	DNA-directed RNA polymerase II subunit RPB11.	RNA polymerase-associated protein LEO1.	0.991
CNBG_0133	CNBG_4003	A0A095BZT5	A0A095DAB9	DNA-directed RNA polymerase II subunit RPB11.	Parafibromin.	0.935
CNBG_0133	CNBG_5174	A0A095BZT5	A0A095DEV8	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase II subunit RPB3.	0.999
CNBG_0133	CNBG_5310	A0A095BZT5	A0A095CGZ0	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CNBG_0133	CNBG_5373	A0A095BZT5	A0A095CGP9	DNA-directed RNA polymerase II subunit RPB11.	RNA polymerase II-associated factor 1.	0.915
CNBG_0133	CNBG_5749	A0A095BZT5	A0A095ET87	DNA-directed RNA polymerase II subunit RPB11.	Uncharacterized protein.	0.747
CNBG_0133	CNBG_6134	A0A095BZT5	A0A095DI31	DNA-directed RNA polymerase II subunit RPB11.	RNA polymerase-associated protein CTR9.	0.954
CNBG_0133	CNBG_6145	A0A095BZT5	A0A095CJF9	DNA-directed RNA polymerase II subunit RPB11.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.966
CNBG_0133	CNBG_9065	A0A095BZT5	A0A0L6DJ64	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CNBG_0133	CNBG_9192	A0A095BZT5	A0A0L6DHW8	DNA-directed RNA polymerase II subunit RPB11.	Uncharacterized protein.	0.903
CNBG_0924	CNBG_0133	A0A095D0X3	A0A095BZT5	DNA-directed RNA polymerase II subunit RPB7.	DNA-directed RNA polymerase II subunit RPB11.	0.999
CNBG_0924	CNBG_1287	A0A095D0X3	A0A095C6Y4	DNA-directed RNA polymerase II subunit RPB7.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.996
CNBG_0924	CNBG_2840	A0A095D0X3	A0A095C921	DNA-directed RNA polymerase II subunit RPB7.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.996
CNBG_0924	CNBG_3265	A0A095D0X3	A0A095CAG3	DNA-directed RNA polymerase II subunit RPB7.	FACT complex subunit SPT16.	0.968
CNBG_0924	CNBG_3852	A0A095D0X3	A0A095CCP3	DNA-directed RNA polymerase II subunit RPB7.	RNA polymerase-associated protein LEO1.	0.991
CNBG_0924	CNBG_4003	A0A095D0X3	A0A095DAB9	DNA-directed RNA polymerase II subunit RPB7.	Parafibromin.	0.940

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