(13 nodes) Organellar small ribosomal subunit network (Cryptococcus gattii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CNBG_0193	Uncharacterized protein. (102 aa)
	CNBG_1403	Mitochondrial carrier protein. (437 aa)
	CNBG_1780	30S small subunit ribosomal protein S5. (329 aa)
	CNBG_2250	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (330 aa)
	CNBG_2718	Uncharacterized protein. (298 aa)
	CNBG_3140	Ribosomal protein S16. (138 aa)
	CNBG_3225	30S small subunit ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (253 aa)
	CNBG_4992	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (176 aa)
	CNBG_0909	30S small subunit ribosomal protein S2. (308 aa)
	CNBG_5186	L51_S25_CI-B8 domain-containing protein. (157 aa)
	CNBG_9352	MRP-S28 domain-containing protein. (203 aa)
	CNBG_9437	Ribosomal_S7 domain-containing protein. (127 aa)
	CNBG_9268	37S ribosomal protein S10, mitochondrial. (169 aa)

Your Current Organism:

Cryptococcus gattii

NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNBG_0193	CNBG_0909	A0A095C015	A0A095D0V0	Uncharacterized protein.	30S small subunit ribosomal protein S2.	0.999
CNBG_0193	CNBG_1403	A0A095C015	A0A095C3Y1	Uncharacterized protein.	Mitochondrial carrier protein.	0.999
CNBG_0193	CNBG_1780	A0A095C015	A0A095C5U0	Uncharacterized protein.	30S small subunit ribosomal protein S5.	0.999
CNBG_0193	CNBG_2250	A0A095C015	A0A095C7B1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
CNBG_0193	CNBG_2718	A0A095C015	A0A095C877	Uncharacterized protein.	Uncharacterized protein.	0.999
CNBG_0193	CNBG_3140	A0A095C015	A0A095CA30	Uncharacterized protein.	Ribosomal protein S16.	0.999
CNBG_0193	CNBG_3225	A0A095C015	A0A095CAB4	Uncharacterized protein.	30S small subunit ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
CNBG_0193	CNBG_4992	A0A095C015	A0A095CIG5	Uncharacterized protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
CNBG_0193	CNBG_5186	A0A095C015	A0A095ER44	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.999
CNBG_0193	CNBG_9268	A0A095C015	A0A0L6DHN7	Uncharacterized protein.	37S ribosomal protein S10, mitochondrial.	0.999
CNBG_0193	CNBG_9352	A0A095C015	A0A0L6DGX1	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.999
CNBG_0193	CNBG_9437	A0A095C015	A0A0L6DHM5	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
CNBG_0909	CNBG_0193	A0A095D0V0	A0A095C015	30S small subunit ribosomal protein S2.	Uncharacterized protein.	0.999
CNBG_0909	CNBG_1403	A0A095D0V0	A0A095C3Y1	30S small subunit ribosomal protein S2.	Mitochondrial carrier protein.	0.999
CNBG_0909	CNBG_1780	A0A095D0V0	A0A095C5U0	30S small subunit ribosomal protein S2.	30S small subunit ribosomal protein S5.	0.999
CNBG_0909	CNBG_2250	A0A095D0V0	A0A095C7B1	30S small subunit ribosomal protein S2.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
CNBG_0909	CNBG_2718	A0A095D0V0	A0A095C877	30S small subunit ribosomal protein S2.	Uncharacterized protein.	0.999
CNBG_0909	CNBG_3140	A0A095D0V0	A0A095CA30	30S small subunit ribosomal protein S2.	Ribosomal protein S16.	0.999
CNBG_0909	CNBG_3225	A0A095D0V0	A0A095CAB4	30S small subunit ribosomal protein S2.	30S small subunit ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
CNBG_0909	CNBG_4992	A0A095D0V0	A0A095CIG5	30S small subunit ribosomal protein S2.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999

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