(6 nodes) Organellar small ribosomal subunit network (Cryptococcus gattii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CNBG_0193	Uncharacterized protein. (102 aa)
	CNBG_1403	Mitochondrial carrier protein. (437 aa)
	CNBG_2250	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (330 aa)
	CNBG_3140	Ribosomal protein S16. (138 aa)
	CNBG_4992	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (176 aa)
	CNBG_9437	Ribosomal_S7 domain-containing protein. (127 aa)

Your Current Organism:

Cryptococcus gattii

NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNBG_0193	CNBG_1403	A0A095C015	A0A095C3Y1	Uncharacterized protein.	Mitochondrial carrier protein.	0.999
CNBG_0193	CNBG_2250	A0A095C015	A0A095C7B1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
CNBG_0193	CNBG_3140	A0A095C015	A0A095CA30	Uncharacterized protein.	Ribosomal protein S16.	0.999
CNBG_0193	CNBG_4992	A0A095C015	A0A095CIG5	Uncharacterized protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
CNBG_0193	CNBG_9437	A0A095C015	A0A0L6DHM5	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.999
CNBG_1403	CNBG_0193	A0A095C3Y1	A0A095C015	Mitochondrial carrier protein.	Uncharacterized protein.	0.999
CNBG_1403	CNBG_2250	A0A095C3Y1	A0A095C7B1	Mitochondrial carrier protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
CNBG_1403	CNBG_3140	A0A095C3Y1	A0A095CA30	Mitochondrial carrier protein.	Ribosomal protein S16.	0.999
CNBG_1403	CNBG_4992	A0A095C3Y1	A0A095CIG5	Mitochondrial carrier protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.997
CNBG_1403	CNBG_9437	A0A095C3Y1	A0A0L6DHM5	Mitochondrial carrier protein.	Ribosomal_S7 domain-containing protein.	0.999
CNBG_2250	CNBG_0193	A0A095C7B1	A0A095C015	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
CNBG_2250	CNBG_1403	A0A095C7B1	A0A095C3Y1	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Mitochondrial carrier protein.	0.999
CNBG_2250	CNBG_3140	A0A095C7B1	A0A095CA30	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S16.	0.999
CNBG_2250	CNBG_4992	A0A095C7B1	A0A095CIG5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
CNBG_2250	CNBG_9437	A0A095C7B1	A0A0L6DHM5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_S7 domain-containing protein.	0.999
CNBG_3140	CNBG_0193	A0A095CA30	A0A095C015	Ribosomal protein S16.	Uncharacterized protein.	0.999
CNBG_3140	CNBG_1403	A0A095CA30	A0A095C3Y1	Ribosomal protein S16.	Mitochondrial carrier protein.	0.999
CNBG_3140	CNBG_2250	A0A095CA30	A0A095C7B1	Ribosomal protein S16.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
CNBG_3140	CNBG_4992	A0A095CA30	A0A095CIG5	Ribosomal protein S16.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
CNBG_3140	CNBG_9437	A0A095CA30	A0A0L6DHM5	Ribosomal protein S16.	Ribosomal_S7 domain-containing protein.	0.999

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