STRINGSTRING
CNBG_0008 CNBG_0008 NOP7 NOP7 CNBG_0048 CNBG_0048 CNBG_0078 CNBG_0078 CNBG_0668 CNBG_0668 CNBG_0708 CNBG_0708 CNBG_0758 CNBG_0758 CNBG_0773 CNBG_0773 CNBG_0465 CNBG_0465 CNBG_0803 CNBG_0803 CNBG_0963 CNBG_0963 CNBG_1063 CNBG_1063 CNBG_0127 CNBG_0127 CNBG_1090 CNBG_1090 CNBG_1095 CNBG_1095 CNBG_0392 CNBG_0392 CNBG_1205 CNBG_1205 CNBG_1433 CNBG_1433 CNBG_1290 CNBG_1290 CNBG_1315 CNBG_1315 CNBG_1588 CNBG_1588 CNBG_1733 CNBG_1733 CNBG_1535 CNBG_1535 CNBG_1788 CNBG_1788 CNBG_2018 CNBG_2018 CNBG_2173 CNBG_2173 CNBG_1222 CNBG_1222 CNBG_2258 CNBG_2258 CNBG_2225 CNBG_2225 CNBG_1402 CNBG_1402 CNBG_2458 CNBG_2458 CNBG_2315 CNBG_2315 CNBG_2345 CNBG_2345 CNBG_2380 CNBG_2380 CNBG_2425 CNBG_2425 CNBG_2683 CNBG_2683 CNBG_2510 CNBG_2510 CNBG_2753 CNBG_2753 CNBG_2655 CNBG_2655 CNBG_2675 CNBG_2675 CNBG_2823 CNBG_2823 CNBG_2895 CNBG_2895 CNBG_2102 CNBG_2102 CNBG_3118 CNBG_3118 CNBG_3045 CNBG_3045 CNBG_3238 CNBG_3238 CNBG_3268 CNBG_3268 CNBG_3383 CNBG_3383 CNBG_3688 CNBG_3688 CNBG_3695 CNBG_3695 CNBG_4089 CNBG_4089 CNBG_3802 CNBG_3802 CNBG_4139 CNBG_4139 CNBG_3847 CNBG_3847 CNBG_3872 CNBG_3872 CNBG_3292 CNBG_3292 CNBG_3809 CNBG_3809 CNBG_3834 CNBG_3834 CNBG_3337 CNBG_3337 CNBG_4388 CNBG_4388 CNBG_3954 CNBG_3954 CNBG_4543 CNBG_4543 CNBG_3642 CNBG_3642 CNBG_4390 CNBG_4390 CNBG_4748 CNBG_4748 CNBG_4151 CNBG_4151 CNBG_4201 CNBG_4201 CNBG_4835 CNBG_4835 CNBG_3841 CNBG_3841 CNBG_5093 CNBG_5093 CNBG_4910 CNBG_4910 YTM1 YTM1 CNBG_5163 CNBG_5163 CNBG_4995 CNBG_4995 CNBG_5408 CNBG_5408 CNBG_5418 CNBG_5418 CNBG_5433 CNBG_5433 CNBG_5583 CNBG_5583 CNBG_5638 CNBG_5638 ERB1 ERB1 CNBG_5923 CNBG_5923 CNBG_5758 CNBG_5758 CNBG_6123 CNBG_6123 CNBG_5985 CNBG_5985 CNBG_5995 CNBG_5995 CNBG_6203 CNBG_6203 CNBG_6025 CNBG_6025 CNBG_5672 CNBG_5672 CNBG_5932 CNBG_5932 CNBG_5937 CNBG_5937 CNBG_6042 CNBG_6042 CNBG_6062 CNBG_6062 CNBG_6122 CNBG_6122 CNBG_6177 CNBG_6177 CNBG_0009 CNBG_0009 CNBG_0189 CNBG_0189 CNBG_0449 CNBG_0449 CNBG_0614 CNBG_0614 CNBG_0699 CNBG_0699 CNBG_0709 CNBG_0709 CNBG_0714 CNBG_0714 CNBG_0729 CNBG_0729 TIF6 TIF6 CNBG_1094 CNBG_1094 CNBG_2299 CNBG_2299 CNBG_3319 CNBG_3319 CNBG_3589 CNBG_3589 CNBG_3738 CNBG_3738 CNBG_4589 CNBG_4589 CNBG_4929 CNBG_4929 NAT10 NAT10 CNBG_5089 CNBG_5089 CNBG_5349 CNBG_5349 CNBG_5404 CNBG_5404 CNBG_5514 CNBG_5514 CNBG_6029 CNBG_6029 CNBG_6084 CNBG_6084 CNBG_6129 CNBG_6129 SPB1 SPB1 CNBG_0366 CNBG_0366 CNBG_0416 CNBG_0416 CNBG_0541 CNBG_0541 CNBG_1076 CNBG_1076 CNBG_1156 CNBG_1156 CNBG_2006 CNBG_2006 CNBG_2141 CNBG_2141 CNBG_2306 CNBG_2306 CNBG_2686 CNBG_2686 CNBG_2696 CNBG_2696 CNBG_3256 CNBG_3256 CNBG_4246 CNBG_4246 CNBG_4301 CNBG_4301 CNBG_4451 CNBG_4451 CNBG_4666 CNBG_4666 CNBG_4746 CNBG_4746 CNBG_4836 CNBG_4836 CNBG_4991 CNBG_4991 CNBG_5306 CNBG_5306 CNBG_5426 CNBG_5426 CNBG_5611 CNBG_5611 CNBG_5856 CNBG_5856 CNBG_5951 CNBG_5951 CNBG_6041 CNBG_6041 CNBG_6136 CNBG_6136 CNBG_9597 CNBG_9597 CNBG_9107 CNBG_9107 CNBG_9567 CNBG_9567 CNBG_9187 CNBG_9187 CNBG_9383 CNBG_9383 CNBG_9142 CNBG_9142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_0008U3 small nucleolar RNA-associated protein 5. (709 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (632 aa)
CNBG_0048NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17). (1077 aa)
CNBG_0078Pumilio domain-containing protein. (678 aa)
CNBG_0668Pre-rRNA-processing protein IPI1. (721 aa)
CNBG_0708ATP-dependent RNA helicase DRS1; Belongs to the DEAD box helicase family. (790 aa)
CNBG_0758Ribosome production factor 2. (317 aa)
CNBG_0773Dual specificity phosphatase 12. (693 aa)
CNBG_0465Exosome complex component RRP4. (331 aa)
CNBG_0803rRNA-processing protein EBP2. (395 aa)
CNBG_0963Periodic tryptophan protein 1. (583 aa)
CNBG_1063RNA helicase. (707 aa)
CNBG_0127Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (696 aa)
CNBG_1090Exosome complex component RRP43. (321 aa)
CNBG_1095Uncharacterized protein. (372 aa)
CNBG_0392ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family. (619 aa)
CNBG_1205ATP-dependent RNA helicase prh1. (735 aa)
CNBG_1433Nucleolin. (446 aa)
CNBG_1290GTPase. (637 aa)
CNBG_1315WD repeat and SOF domain-containing protein 1. (457 aa)
CNBG_1588Nucleolar protein 58. (566 aa)
CNBG_1733RNase_PH domain-containing protein. (332 aa)
CNBG_1535Cell growth-regulating nucleolar protein. (310 aa)
CNBG_1788Protein MAK16; Belongs to the MAK16 family. (343 aa)
CNBG_2018Ribosome biogenesis protein UTP30. (362 aa)
CNBG_2173Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
CNBG_1222RNA-binding protein rnp24. (451 aa)
CNBG_2258RNB domain-containing protein. (1538 aa)
CNBG_2225Uncharacterized protein. (465 aa)
CNBG_1402Nucleolar protein 53. (351 aa)
CNBG_2458Periodic tryptophan protein 2. (884 aa)
CNBG_2315rRNA biogenesis protein RRP36. (382 aa)
CNBG_234518S rRNA biogenesis protein RCL1. (365 aa)
CNBG_2380ATP-dependent RNA helicase ROK1. (618 aa)
CNBG_2425Cytoplasmic protein. (202 aa)
CNBG_2683U3 small nucleolar RNA-associated protein 10. (2001 aa)
CNBG_2510ATP-dependent RNA helicase MAK5; Belongs to the DEAD box helicase family. (772 aa)
CNBG_2753Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (839 aa)
CNBG_2655Protein BFR2. (469 aa)
CNBG_2675Protein KRI1. (743 aa)
CNBG_2823Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (529 aa)
CNBG_2895ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (484 aa)
CNBG_2102Ribosomal RNA-processing protein 7. (404 aa)
CNBG_311860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (540 aa)
CNBG_3045Protein MAK11. (509 aa)
CNBG_3238Exosome complex component RRP45. (196 aa)
CNBG_3268ATP-dependent RNA helicase DHX37/DHR1. (1287 aa)
CNBG_3383Nuclear GTP-binding protein. (639 aa)
CNBG_3688Bud site selection protein 20. (140 aa)
CNBG_3695Nucleolar protein 16. (212 aa)
CNBG_4089Ribosome biogenesis protein BRX1. (287 aa)
CNBG_3802DNA polymerase phi subunit. (1167 aa)
CNBG_4139rRNA biogenesis protein RRP5. (1486 aa)
CNBG_3847Ribosome biogenesis protein SSF1/2. (441 aa)
CNBG_3872Nucleolar protein 12. (597 aa)
CNBG_3292Uncharacterized protein. (477 aa)
CNBG_3809Large subunit GTPase 1. (736 aa)
CNBG_3834Nuclear GTP-binding protein. (670 aa)
CNBG_333750S small subunit ribosomal protein L24e. (198 aa)
CNBG_4388Uncharacterized protein. (281 aa)
CNBG_3954Uncharacterized protein. (775 aa)
CNBG_4543U3 small nucleolar RNA-associated protein 11. (316 aa)
CNBG_3642Multiple RNA-binding domain-containing protein 1. (712 aa)
CNBG_4390Nucleolar complex protein 2. (748 aa)
CNBG_4748U3 small nucleolar RNA-associated protein 23. (293 aa)
CNBG_4151U3 small nucleolar ribonucleoprotein IMP4. (288 aa)
CNBG_4201ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family. (603 aa)
CNBG_4835Pin2-interacting protein X1. (408 aa)
CNBG_3841Ribosome assembly protein RRB1. (495 aa)
CNBG_5093Nucleolar protein. (476 aa)
CNBG_4910ATP-dependent RNA helicase DBP9. (627 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (486 aa)
CNBG_5163Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (315 aa)
CNBG_4995Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (666 aa)
CNBG_540860S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (181 aa)
CNBG_5418Ribosome biogenesis protein ENP2. (771 aa)
CNBG_5433U3 small nucleolar RNA-associated protein 6. (447 aa)
CNBG_5583Uncharacterized protein. (430 aa)
CNBG_5638Ribosomal RNA-processing protein 9. (546 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (838 aa)
CNBG_5923Translation machinery-associated protein 16. (214 aa)
CNBG_5758U3 small nucleolar ribonucleoprotein LCP5. (382 aa)
CNBG_6123Pre-60S factor REI1. (413 aa)
CNBG_5985RNase_PH domain-containing protein. (299 aa)
CNBG_5995RNA helicase. (948 aa)
CNBG_6203U3 small nucleolar RNA-associated protein 14. (952 aa)
CNBG_6025Exosome complex exonuclease DIS3/RRP44; Belongs to the RNR ribonuclease family. (1002 aa)
CNBG_5672Exosome complex component MTR3. (268 aa)
CNBG_5932KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (403 aa)
CNBG_5937Ribosome assembly protein 4. (523 aa)
CNBG_6042Uncharacterized protein. (158 aa)
CNBG_6062Uncharacterized protein. (332 aa)
CNBG_6122ATP-dependent RNA helicase DBP10. (798 aa)
CNBG_6177U3 small nucleolar RNA-associated protein 18. (624 aa)
CNBG_0009RNA helicase. (543 aa)
CNBG_0189Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (245 aa)
CNBG_0449Elongation factor 3. (1100 aa)
CNBG_0614Exosome complex component CSL4. (191 aa)
CNBG_0699Nucleolar protein 6. (393 aa)
CNBG_0709Exosome complex component RRP40. (247 aa)
CNBG_0714U3 small nucleolar RNA-associated protein 22. (1237 aa)
CNBG_0729U3 small nucleolar RNA-associated protein 21. (597 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)
CNBG_1094Uncharacterized protein. (393 aa)
CNBG_2299Ribosomal RNA-processing protein 1. (353 aa)
CNBG_3319Ribosome production factor 1. (429 aa)
CNBG_3589Nucleolar protein 15. (439 aa)
CNBG_3738rRNA 2'-O-methyltransferase fibrillarin. (314 aa)
CNBG_4589U3 small nucleolar RNA-associated protein 12. (988 aa)
CNBG_4929MIF4G/MA4 domain-containing protein. (872 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (724 aa)
CNBG_5089U3 small nucleolar RNA-associated protein 3. (715 aa)
CNBG_5349Nucleolar protein 56. (571 aa)
CNBG_5404U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (776 aa)
CNBG_5514Ribosomal RNA-processing protein 17. (247 aa)
CNBG_6029DNA-binding protein, 42 kDa. (394 aa)
CNBG_6084Multisite-specific tRNA:(Cytosine-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (750 aa)
CNBG_6129U3 small nucleolar RNA-associated protein 7. (624 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (908 aa)
CNBG_0366Exosome complex protein LRP1. (205 aa)
CNBG_0416NUC153 domain-containing protein. (798 aa)
CNBG_0541Uncharacterized protein. (521 aa)
CNBG_1076U3 small nucleolar ribonucleoprotein IMP3. (182 aa)
CNBG_1156U3 small nucleolar RNA-associated protein 15. (523 aa)
CNBG_2006U3 small nucleolar RNA-associated protein 19. (420 aa)
CNBG_2141U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (715 aa)
CNBG_2306Pre-rRNA-processing protein TSR2. (213 aa)
CNBG_2686Ribosome biogenesis protein MAK21. (1122 aa)
CNBG_2696Chaperone. (409 aa)
CNBG_3256Ribosome biogenesis protein BMS1. (1139 aa)
CNBG_4246RNA helicase. (724 aa)
CNBG_4301U3 small nucleolar RNA-associated protein 20. (2586 aa)
CNBG_4451Uncharacterized protein. (737 aa)
CNBG_4666Uncharacterized protein. (250 aa)
CNBG_4746Uncharacterized protein. (582 aa)
CNBG_4836Ribosome biogenesis protein NSA2. (254 aa)
CNBG_4991Nucleolar protein 4. (980 aa)
CNBG_5306U3 small nucleolar RNA-associated protein 24. (181 aa)
CNBG_5426ATP-dependent RNA helicase A. (1434 aa)
CNBG_5611Nucleolar essential protein 1. (330 aa)
CNBG_5856Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (724 aa)
CNBG_5951RNase_PH domain-containing protein. (109 aa)
CNBG_6041Uncharacterized protein. (324 aa)
CNBG_6136Pre-rRNA-processing protein ESF2. (264 aa)
CNBG_9597Uncharacterized protein. (90 aa)
CNBG_9107ATP-dependent RNA helicase DBP4; Belongs to the DEAD box helicase family. (851 aa)
CNBG_9567Ribosomal RNA-processing protein 12. (1326 aa)
CNBG_9187Pre-rRNA-processing protein IPI3. (508 aa)
CNBG_9383U3 small nucleolar RNA-associated protein 13. (903 aa)
CNBG_9142Nucleolar protein 14. (932 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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