STRINGSTRING
CNBG_0008 CNBG_0008 CNBG_0048 CNBG_0048 CNBG_0465 CNBG_0465 CNBG_1090 CNBG_1090 CNBG_0392 CNBG_0392 CNBG_1205 CNBG_1205 CNBG_1315 CNBG_1315 CNBG_1588 CNBG_1588 CNBG_1733 CNBG_1733 CNBG_2173 CNBG_2173 CNBG_2258 CNBG_2258 CNBG_2458 CNBG_2458 CNBG_2315 CNBG_2315 CNBG_2345 CNBG_2345 CNBG_2380 CNBG_2380 CNBG_2683 CNBG_2683 CNBG_2655 CNBG_2655 CNBG_2895 CNBG_2895 CNBG_2102 CNBG_2102 CNBG_3238 CNBG_3238 CNBG_3268 CNBG_3268 CNBG_4139 CNBG_4139 CNBG_4543 CNBG_4543 CNBG_4151 CNBG_4151 CNBG_5093 CNBG_5093 CNBG_5418 CNBG_5418 CNBG_5433 CNBG_5433 CNBG_5638 CNBG_5638 CNBG_5758 CNBG_5758 CNBG_5985 CNBG_5985 CNBG_6203 CNBG_6203 CNBG_6025 CNBG_6025 CNBG_5672 CNBG_5672 CNBG_5932 CNBG_5932 CNBG_6177 CNBG_6177 CNBG_0614 CNBG_0614 CNBG_0709 CNBG_0709 CNBG_0714 CNBG_0714 CNBG_0729 CNBG_0729 CNBG_1094 CNBG_1094 CNBG_3738 CNBG_3738 CNBG_4589 CNBG_4589 CNBG_4929 CNBG_4929 NAT10 NAT10 CNBG_5089 CNBG_5089 CNBG_5349 CNBG_5349 CNBG_5404 CNBG_5404 CNBG_6129 CNBG_6129 CNBG_0366 CNBG_0366 CNBG_0416 CNBG_0416 CNBG_1076 CNBG_1076 CNBG_1156 CNBG_1156 CNBG_2006 CNBG_2006 CNBG_2141 CNBG_2141 CNBG_3256 CNBG_3256 CNBG_4301 CNBG_4301 CNBG_5306 CNBG_5306 CNBG_5611 CNBG_5611 CNBG_5951 CNBG_5951 CNBG_6041 CNBG_6041 CNBG_6136 CNBG_6136 CNBG_9107 CNBG_9107 CNBG_9383 CNBG_9383 CNBG_9142 CNBG_9142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_0008U3 small nucleolar RNA-associated protein 5. (709 aa)
CNBG_0048NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17). (1077 aa)
CNBG_0465Exosome complex component RRP4. (331 aa)
CNBG_1090Exosome complex component RRP43. (321 aa)
CNBG_0392ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family. (619 aa)
CNBG_1205ATP-dependent RNA helicase prh1. (735 aa)
CNBG_1315WD repeat and SOF domain-containing protein 1. (457 aa)
CNBG_1588Nucleolar protein 58. (566 aa)
CNBG_1733RNase_PH domain-containing protein. (332 aa)
CNBG_2173Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
CNBG_2258RNB domain-containing protein. (1538 aa)
CNBG_2458Periodic tryptophan protein 2. (884 aa)
CNBG_2315rRNA biogenesis protein RRP36. (382 aa)
CNBG_234518S rRNA biogenesis protein RCL1. (365 aa)
CNBG_2380ATP-dependent RNA helicase ROK1. (618 aa)
CNBG_2683U3 small nucleolar RNA-associated protein 10. (2001 aa)
CNBG_2655Protein BFR2. (469 aa)
CNBG_2895ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (484 aa)
CNBG_2102Ribosomal RNA-processing protein 7. (404 aa)
CNBG_3238Exosome complex component RRP45. (196 aa)
CNBG_3268ATP-dependent RNA helicase DHX37/DHR1. (1287 aa)
CNBG_4139rRNA biogenesis protein RRP5. (1486 aa)
CNBG_4543U3 small nucleolar RNA-associated protein 11. (316 aa)
CNBG_4151U3 small nucleolar ribonucleoprotein IMP4. (288 aa)
CNBG_5093Nucleolar protein. (476 aa)
CNBG_5418Ribosome biogenesis protein ENP2. (771 aa)
CNBG_5433U3 small nucleolar RNA-associated protein 6. (447 aa)
CNBG_5638Ribosomal RNA-processing protein 9. (546 aa)
CNBG_5758U3 small nucleolar ribonucleoprotein LCP5. (382 aa)
CNBG_5985RNase_PH domain-containing protein. (299 aa)
CNBG_6203U3 small nucleolar RNA-associated protein 14. (952 aa)
CNBG_6025Exosome complex exonuclease DIS3/RRP44; Belongs to the RNR ribonuclease family. (1002 aa)
CNBG_5672Exosome complex component MTR3. (268 aa)
CNBG_5932KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (403 aa)
CNBG_6177U3 small nucleolar RNA-associated protein 18. (624 aa)
CNBG_0614Exosome complex component CSL4. (191 aa)
CNBG_0709Exosome complex component RRP40. (247 aa)
CNBG_0714U3 small nucleolar RNA-associated protein 22. (1237 aa)
CNBG_0729U3 small nucleolar RNA-associated protein 21. (597 aa)
CNBG_1094Uncharacterized protein. (393 aa)
CNBG_3738rRNA 2'-O-methyltransferase fibrillarin. (314 aa)
CNBG_4589U3 small nucleolar RNA-associated protein 12. (988 aa)
CNBG_4929MIF4G/MA4 domain-containing protein. (872 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (724 aa)
CNBG_5089U3 small nucleolar RNA-associated protein 3. (715 aa)
CNBG_5349Nucleolar protein 56. (571 aa)
CNBG_5404U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (776 aa)
CNBG_6129U3 small nucleolar RNA-associated protein 7. (624 aa)
CNBG_0366Exosome complex protein LRP1. (205 aa)
CNBG_0416NUC153 domain-containing protein. (798 aa)
CNBG_1076U3 small nucleolar ribonucleoprotein IMP3. (182 aa)
CNBG_1156U3 small nucleolar RNA-associated protein 15. (523 aa)
CNBG_2006U3 small nucleolar RNA-associated protein 19. (420 aa)
CNBG_2141U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (715 aa)
CNBG_3256Ribosome biogenesis protein BMS1. (1139 aa)
CNBG_4301U3 small nucleolar RNA-associated protein 20. (2586 aa)
CNBG_5306U3 small nucleolar RNA-associated protein 24. (181 aa)
CNBG_5611Nucleolar essential protein 1. (330 aa)
CNBG_5951RNase_PH domain-containing protein. (109 aa)
CNBG_6041Uncharacterized protein. (324 aa)
CNBG_6136Pre-rRNA-processing protein ESF2. (264 aa)
CNBG_9107ATP-dependent RNA helicase DBP4; Belongs to the DEAD box helicase family. (851 aa)
CNBG_9383U3 small nucleolar RNA-associated protein 13. (903 aa)
CNBG_9142Nucleolar protein 14. (932 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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