(5 nodes) Pwp2p-containing subcomplex of 90S preribosome network (Cryptococcus gattii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

Your Input:
	CNBG_2458	Periodic tryptophan protein 2. (884 aa)
	CNBG_5433	U3 small nucleolar RNA-associated protein 6. (447 aa)
	CNBG_6177	U3 small nucleolar RNA-associated protein 18. (624 aa)
	CNBG_4589	U3 small nucleolar RNA-associated protein 12. (988 aa)
	CNBG_9383	U3 small nucleolar RNA-associated protein 13. (903 aa)

Your Current Organism:

Cryptococcus gattii

NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNBG_2458	CNBG_4589	A0A095C7H2	A0A095DD16	Periodic tryptophan protein 2.	U3 small nucleolar RNA-associated protein 12.	0.999
CNBG_2458	CNBG_5433	A0A095C7H2	A0A095CGX3	Periodic tryptophan protein 2.	U3 small nucleolar RNA-associated protein 6.	0.999
CNBG_2458	CNBG_6177	A0A095C7H2	A0A095CM47	Periodic tryptophan protein 2.	U3 small nucleolar RNA-associated protein 18.	0.999
CNBG_2458	CNBG_9383	A0A095C7H2	A0A0L6DIK4	Periodic tryptophan protein 2.	U3 small nucleolar RNA-associated protein 13.	0.999
CNBG_4589	CNBG_2458	A0A095DD16	A0A095C7H2	U3 small nucleolar RNA-associated protein 12.	Periodic tryptophan protein 2.	0.999
CNBG_4589	CNBG_5433	A0A095DD16	A0A095CGX3	U3 small nucleolar RNA-associated protein 12.	U3 small nucleolar RNA-associated protein 6.	0.999
CNBG_4589	CNBG_6177	A0A095DD16	A0A095CM47	U3 small nucleolar RNA-associated protein 12.	U3 small nucleolar RNA-associated protein 18.	0.999
CNBG_4589	CNBG_9383	A0A095DD16	A0A0L6DIK4	U3 small nucleolar RNA-associated protein 12.	U3 small nucleolar RNA-associated protein 13.	0.999
CNBG_5433	CNBG_2458	A0A095CGX3	A0A095C7H2	U3 small nucleolar RNA-associated protein 6.	Periodic tryptophan protein 2.	0.999
CNBG_5433	CNBG_4589	A0A095CGX3	A0A095DD16	U3 small nucleolar RNA-associated protein 6.	U3 small nucleolar RNA-associated protein 12.	0.999
CNBG_5433	CNBG_6177	A0A095CGX3	A0A095CM47	U3 small nucleolar RNA-associated protein 6.	U3 small nucleolar RNA-associated protein 18.	0.999
CNBG_5433	CNBG_9383	A0A095CGX3	A0A0L6DIK4	U3 small nucleolar RNA-associated protein 6.	U3 small nucleolar RNA-associated protein 13.	0.999
CNBG_6177	CNBG_2458	A0A095CM47	A0A095C7H2	U3 small nucleolar RNA-associated protein 18.	Periodic tryptophan protein 2.	0.999
CNBG_6177	CNBG_4589	A0A095CM47	A0A095DD16	U3 small nucleolar RNA-associated protein 18.	U3 small nucleolar RNA-associated protein 12.	0.999
CNBG_6177	CNBG_5433	A0A095CM47	A0A095CGX3	U3 small nucleolar RNA-associated protein 18.	U3 small nucleolar RNA-associated protein 6.	0.999
CNBG_6177	CNBG_9383	A0A095CM47	A0A0L6DIK4	U3 small nucleolar RNA-associated protein 18.	U3 small nucleolar RNA-associated protein 13.	0.999
CNBG_9383	CNBG_2458	A0A0L6DIK4	A0A095C7H2	U3 small nucleolar RNA-associated protein 13.	Periodic tryptophan protein 2.	0.999
CNBG_9383	CNBG_4589	A0A0L6DIK4	A0A095DD16	U3 small nucleolar RNA-associated protein 13.	U3 small nucleolar RNA-associated protein 12.	0.999
CNBG_9383	CNBG_5433	A0A0L6DIK4	A0A095CGX3	U3 small nucleolar RNA-associated protein 13.	U3 small nucleolar RNA-associated protein 6.	0.999
CNBG_9383	CNBG_6177	A0A0L6DIK4	A0A095CM47	U3 small nucleolar RNA-associated protein 13.	U3 small nucleolar RNA-associated protein 18.	0.999

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