STRINGSTRING
CNBG_0068 CNBG_0068 CNBG_0418 CNBG_0418 CNBG_0423 CNBG_0423 CNBG_0473 CNBG_0473 CNBG_0275 CNBG_0275 CNBG_0673 CNBG_0673 CNBG_0768 CNBG_0768 LSM5 LSM5 CNBG_0958 CNBG_0958 CNBG_0730 CNBG_0730 CNBG_0770 CNBG_0770 CNBG_0102 CNBG_0102 CNBG_1198 CNBG_1198 CNBG_1218 CNBG_1218 CNBG_1005 CNBG_1005 LSM8 LSM8 CNBG_0352 CNBG_0352 CNBG_0407 CNBG_0407 CNBG_1235 CNBG_1235 CNBG_0442 CNBG_0442 CNBG_1558 CNBG_1558 CNBG_0542 CNBG_0542 CNBG_1608 CNBG_1608 CNBG_0787 CNBG_0787 CNBG_1660 CNBG_1660 CNBG_1848 CNBG_1848 CNBG_1858 CNBG_1858 CNBG_1948 CNBG_1948 CNBG_1968 CNBG_1968 CNBG_1973 CNBG_1973 CNBG_0927 CNBG_0927 CNBG_1830 CNBG_1830 CNBG_1875 CNBG_1875 CNBG_2253 CNBG_2253 CNBG_2045 CNBG_2045 CNBG_2125 CNBG_2125 CNBG_2403 CNBG_2403 CNBG_2325 CNBG_2325 CNBG_1447 CNBG_1447 CNBG_2513 CNBG_2513 CNBG_1532 CNBG_1532 CNBG_2618 CNBG_2618 CNBG_2863 CNBG_2863 CNBG_2878 CNBG_2878 CNBG_2888 CNBG_2888 CNBG_3273 CNBG_3273 CNBG_3373 CNBG_3373 CNBG_2502 CNBG_2502 CNBG_2602 CNBG_2602 CNBG_2662 CNBG_2662 CNBG_3440 CNBG_3440 CNBG_2912 CNBG_2912 CNBG_3807 CNBG_3807 CNBG_4129 CNBG_4129 CNBG_3887 CNBG_3887 CNBG_3272 CNBG_3272 CNBG_3357 CNBG_3357 CNBG_4530 CNBG_4530 CNBG_4700 CNBG_4700 CNBG_4191 CNBG_4191 CNBG_4437 CNBG_4437 CNBG_4592 CNBG_4592 CNBG_5658 CNBG_5658 CNBG_5673 CNBG_5673 CNBG_5728 CNBG_5728 CNBG_4797 CNBG_4797 CNBG_6098 CNBG_6098 CNBG_5152 CNBG_5152 CNBG_5930 CNBG_5930 CNBG_5427 CNBG_5427 CNBG_5755 CNBG_5755 CNBG_6047 CNBG_6047 CNBG_6192 CNBG_6192 CNBG_0084 CNBG_0084 CNBG_0254 CNBG_0254 CNBG_0664 CNBG_0664 CNBG_0839 CNBG_0839 CNBG_1169 CNBG_1169 CNBG_1244 CNBG_1244 CNBG_1624 CNBG_1624 CNBG_1939 CNBG_1939 CNBG_2329 CNBG_2329 CNBG_2574 CNBG_2574 CNBG_2684 CNBG_2684 CNBG_3119 CNBG_3119 CNBG_3334 CNBG_3334 CNBG_3404 CNBG_3404 CNBG_3828 CNBG_3828 CNBG_5837 CNBG_5837 CNBG_6179 CNBG_6179 CNBG_0101 CNBG_0101 CNBG_0411 CNBG_0411 CNBG_0661 CNBG_0661 CNBG_1881 CNBG_1881 CNBG_1886 CNBG_1886 CNBG_2291 CNBG_2291 CNBG_2656 CNBG_2656 CNBG_2911 CNBG_2911 CNBG_3101 CNBG_3101 CNBG_3626 CNBG_3626 CNBG_4015 CNBG_4015 CNBG_3780 CNBG_3780 CNBG_4856 CNBG_4856 CNBG_5136 CNBG_5136 CNBG_5411 CNBG_5411 CNBG_5641 CNBG_5641 CNBG_9421 CNBG_9421 CNBG_9292 CNBG_9292 CNBG_9293 CNBG_9293 CNBG_9560 CNBG_9560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_0068ATP-dependent RNA helicase DDX35. (698 aa)
CNBG_0418U1 small nuclear ribonucleoprotein 70kDa. (429 aa)
CNBG_0423Cyclophilin. (141 aa)
CNBG_0473Pre-mRNA-processing factor 6. (946 aa)
CNBG_0275Splicing factor 45. (626 aa)
CNBG_0673Splicing factor 3A subunit 2. (218 aa)
CNBG_0768Small nuclear ribonucleoprotein F. (87 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (122 aa)
CNBG_0958Microfibrillar-associated protein 1. (396 aa)
CNBG_0730Pre-mRNA-splicing factor SLU7. (586 aa)
CNBG_0770Pre-mRNA-splicing factor 38A. (269 aa)
CNBG_0102zf-C2HC5 domain-containing protein. (439 aa)
CNBG_1198Uncharacterized protein. (616 aa)
CNBG_1218Pre-mRNA-splicing factor SLT11. (326 aa)
CNBG_1005Peptide alpha-N-acetyltransferase. (218 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
CNBG_0352Uncharacterized protein. (354 aa)
CNBG_0407Transcription elongation regulator 1. (504 aa)
CNBG_1235Pre-mRNA-splicing factor CLF1. (457 aa)
CNBG_0442Splicing factor 3A subunit 1. (761 aa)
CNBG_1558Pre-mRNA-splicing factor CWC26. (332 aa)
CNBG_0542ATP-dependent RNA helicase DHX8/PRP22. (1171 aa)
CNBG_1608Pre-mRNA-splicing factor CWC22. (804 aa)
CNBG_0787Uncharacterized protein. (558 aa)
CNBG_1660Pre-mRNA-splicing factor 18. (365 aa)
CNBG_1848Pre-mRNA-splicing factor SPF27. (218 aa)
CNBG_1858Pre-mRNA-splicing factor ini1. (116 aa)
CNBG_1948RED_N domain-containing protein. (568 aa)
CNBG_1968Rhamnogalacturonan lyase. (651 aa)
CNBG_1973Pre-mRNA-splicing helicase BRR2. (2153 aa)
CNBG_0927Cell cycle control protein cwf19. (890 aa)
CNBG_1830Uncharacterized protein. (164 aa)
CNBG_1875Tuftelin-interacting protein 11. (894 aa)
CNBG_2253Pre-mRNA-processing factor 17. (615 aa)
CNBG_2045Prp8 binding protein. (374 aa)
CNBG_2125RNA recognition domain-containing protein (RRM)-containing protein. (249 aa)
CNBG_2403U4/U6.U5 tri-snRNP-associated protein 3. (274 aa)
CNBG_2325Pre-mRNA-splicing factor PRP46. (473 aa)
CNBG_1447Pre-mRNA-splicing factor RSE1. (1217 aa)
CNBG_2513Pre-mRNA-splicing factor SYF2. (272 aa)
CNBG_1532Small nuclear ribonucleoprotein Sm D2. (111 aa)
CNBG_2618Splicing factor 3B subunit 1. (1154 aa)
CNBG_2863RRM domain-containing protein. (190 aa)
CNBG_2878Smad nuclear-interacting protein 1. (254 aa)
CNBG_2888Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
CNBG_3273Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1082 aa)
CNBG_3373Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
CNBG_2502U4/U6.U5 tri-snRNP component SNU23. (276 aa)
CNBG_2602Uncharacterized protein. (732 aa)
CNBG_2662Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (142 aa)
CNBG_3440Abhydrolase_3 domain-containing protein. (579 aa)
CNBG_2912Uncharacterized protein. (615 aa)
CNBG_3807Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)
CNBG_4129Pre-mRNA-splicing factor SYF1. (1031 aa)
CNBG_3887Splicing factor 3A subunit 3. (512 aa)
CNBG_3272Pre-mRNA-processing factor 19. (508 aa)
CNBG_3357Tudor domain-containing protein. (250 aa)
CNBG_4530Splicing factor 3B subunit 4. (308 aa)
CNBG_4700Pre-mRNA branch site protein p14. (120 aa)
CNBG_4191Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
CNBG_4437Pre-mRNA-processing protein 45. (594 aa)
CNBG_4592Ubiquitin-like protein 5. (233 aa)
CNBG_5658Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (179 aa)
CNBG_5673Small nuclear ribonucleoprotein B and B. (197 aa)
CNBG_5728Beta-catenin-like protein 1. (399 aa)
CNBG_4797Delayed-type hypersensitivity antigen. (211 aa)
CNBG_6098RRM domain-containing protein. (261 aa)
CNBG_5152RNA binding protein. (282 aa)
CNBG_5930U4/U6 small nuclear ribonucleoprotein PRP4. (511 aa)
CNBG_5427Small nuclear ribonucleoprotein Sm D3. (124 aa)
CNBG_5755Bud site selection protein 31. (148 aa)
CNBG_6047Transcription factor. (552 aa)
CNBG_6192Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
CNBG_0084Peptidylprolyl isomerase domain and WD-repeat protein 1. (648 aa)
CNBG_0254Uncharacterized protein. (446 aa)
CNBG_0664Pre-mRNA-splicing factor CWC25. (434 aa)
CNBG_0839Pre-mRNA-splicing factor ISY1. (347 aa)
CNBG_1169Coiled-coil domain-containing protein 12. (156 aa)
CNBG_1244Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. (738 aa)
CNBG_1624U2 small nuclear ribonucleoprotein A. (253 aa)
CNBG_1939Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43. (783 aa)
CNBG_2329Splicing factor 3B subunit 2. (574 aa)
CNBG_2574U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (214 aa)
CNBG_2684CD2 antigen cytoplasmic tail-binding protein 2. (432 aa)
CNBG_3119Pre-mRNA-splicing factor CEF1. (838 aa)
CNBG_3334U4/U6 small nuclear ribonucleoprotein PRP3. (354 aa)
CNBG_3404Chaperone DNAJ. (268 aa)
CNBG_3828UBP-type domain-containing protein. (303 aa)
CNBG_5837Small nuclear ribonucleoprotein G. (78 aa)
CNBG_6179Serine/arginine repetitive matrix protein 1. (374 aa)
CNBG_0101Pre-mRNA-processing ATP-dependent RNA helicase PRP5. (1068 aa)
CNBG_0411Pre-mRNA-processing-splicing factor 8. (2465 aa)
CNBG_0661U5 small nuclear ribonucleoprotein component. (995 aa)
CNBG_1881U2-associated protein SR140. (733 aa)
CNBG_1886Uncharacterized protein. (1348 aa)
CNBG_2291Pre-mRNA-splicing factor CWC21. (243 aa)
CNBG_2656RNA helicase. (1666 aa)
CNBG_2911Pre-mRNA-splicing factor CWC24. (208 aa)
CNBG_3101Sm domain-containing protein. (189 aa)
CNBG_3626Nuclear mRNA splicing protein. (309 aa)
CNBG_4015Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1302 aa)
CNBG_3780U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
CNBG_4856Uncharacterized protein. (453 aa)
CNBG_5136Protein CWC15. (271 aa)
CNBG_5411U4/U6 small nuclear ribonucleoprotein PRP31. (553 aa)
CNBG_5641Peptidyl-prolyl isomerase CWC27. (490 aa)
CNBG_9421Peptidyl-prolyl isomerase G (Cyclophilin G). (426 aa)
CNBG_9292Uncharacterized protein. (182 aa)
CNBG_9293U4/U6.U5 tri-snRNP-associated protein 1. (500 aa)
CNBG_9560Uncharacterized protein. (324 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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