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CNBG_0473 CNBG_0473 LSM5 LSM5 LSM8 LSM8 CNBG_0352 CNBG_0352 CNBG_1973 CNBG_1973 CNBG_1830 CNBG_1830 CNBG_2045 CNBG_2045 CNBG_1532 CNBG_1532 CNBG_2662 CNBG_2662 CNBG_1244 CNBG_1244 CNBG_0411 CNBG_0411 CNBG_0661 CNBG_0661 CNBG_3780 CNBG_3780
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_0473Pre-mRNA-processing factor 6. (946 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (122 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
CNBG_0352Uncharacterized protein. (354 aa)
CNBG_1973Pre-mRNA-splicing helicase BRR2. (2153 aa)
CNBG_1830Uncharacterized protein. (164 aa)
CNBG_2045Prp8 binding protein. (374 aa)
CNBG_1532Small nuclear ribonucleoprotein Sm D2. (111 aa)
CNBG_2662Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (142 aa)
CNBG_1244Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family. (738 aa)
CNBG_0411Pre-mRNA-processing-splicing factor 8. (2465 aa)
CNBG_0661U5 small nuclear ribonucleoprotein component. (995 aa)
CNBG_3780U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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