STRINGSTRING
CNBG_1733 CNBG_1733 CNBG_0078 CNBG_0078 CNBG_0143 CNBG_0143 CNBG_0213 CNBG_0213 CNBG_0303 CNBG_0303 CNBG_0110 CNBG_0110 CNBG_0465 CNBG_0465 LSM5 LSM5 CNBG_0978 CNBG_0978 CNBG_1090 CNBG_1090 CNBG_1265 CNBG_1265 CNBG_1528 CNBG_1528 CNBG_1723 CNBG_1723 MCM7 MCM7 CNBG_0937 CNBG_0937 CNBG_2143 CNBG_2143 CNBG_1930 CNBG_1930 CNBG_2258 CNBG_2258 CNBG_1337 CNBG_1337 CNBG_1352 CNBG_1352 CNBG_1372 CNBG_1372 CNBG_2290 CNBG_2290 CNBG_2320 CNBG_2320 CNBG_2395 CNBG_2395 CNBG_2430 CNBG_2430 CNBG_2445 CNBG_2445 CNBG_1692 CNBG_1692 CNBG_1747 CNBG_1747 CNBG_1922 CNBG_1922 CNBG_3238 CNBG_3238 CNBG_3258 CNBG_3258 CNBG_2382 CNBG_2382 CNBG_3403 CNBG_3403 CNBG_3350 CNBG_3350 CNBG_2747 CNBG_2747 CNBG_4077 CNBG_4077 CNBG_9147 CNBG_9147 CNBG_06215 CNBG_06215 CNBG_9069 CNBG_9069 CNBG_9025 CNBG_9025 PAN3 PAN3 CNBG_5951 CNBG_5951 CNBG_5794 CNBG_5794 CNBG_5749 CNBG_5749 CNBG_5851 CNBG_5851 CNBG_5131 CNBG_5131 CNBG_2907 CNBG_2907 CNBG_3757 CNBG_3757 CNBG_3252 CNBG_3252 CNBG_3332 CNBG_3332 CNBG_3899 CNBG_3899 CNBG_3487 CNBG_3487 LSM4 LSM4 CNBG_4668 CNBG_4668 CNBG_4718 CNBG_4718 CNBG_4525 CNBG_4525 CNBG_4813 CNBG_4813 CNBG_5003 CNBG_5003 CNBG_4965 CNBG_4965 CNBG_4312 CNBG_4312 CNBG_5373 CNBG_5373 CNBG_4502 CNBG_4502 CNBG_5483 CNBG_5483 CNBG_4547 CNBG_4547 CNBG_5425 CNBG_5425 LSM1 LSM1 CNBG_5751 CNBG_5751 CNBG_4932 CNBG_4932 PAN2 PAN2 CNBG_5097 CNBG_5097 CNBG_6133 CNBG_6133 CNBG_5985 CNBG_5985 CNBG_6025 CNBG_6025 CNBG_6145 CNBG_6145 CNBG_5467 CNBG_5467 CNBG_5672 CNBG_5672 CNBG_5770 CNBG_5770 CNBG_5957 CNBG_5957 CNBG_5962 CNBG_5962 CNBG_0189 CNBG_0189 CNBG_0454 CNBG_0454 CNBG_0469 CNBG_0469 CNBG_0614 CNBG_0614 CNBG_0619 CNBG_0619 CNBG_0709 CNBG_0709 CNBG_0924 CNBG_0924 CNBG_1719 CNBG_1719 CNBG_2044 CNBG_2044 CNBG_3059 CNBG_3059 CNBG_3464 CNBG_3464 CNBG_3579 CNBG_3579 CNBG_3624 CNBG_3624 CNBG_3873 CNBG_3873 CNBG_5234 CNBG_5234 CNBG_5319 CNBG_5319 CNBG_5574 CNBG_5574 CNBG_5679 CNBG_5679 CNBG_5709 CNBG_5709 CNBG_5734 CNBG_5734 CNBG_0231 CNBG_0231 CNBG_0326 CNBG_0326 CNBG_0366 CNBG_0366 CNBG_0441 CNBG_0441 CNBG_0451 CNBG_0451 CNBG_0826 CNBG_0826 CNBG_1541 CNBG_1541 CNBG_1716 CNBG_1716 CNBG_1746 CNBG_1746 CNBG_2046 CNBG_2046 CNBG_2151 CNBG_2151 CNBG_2286 CNBG_2286 CNBG_2411 CNBG_2411 CNBG_2451 CNBG_2451 CNBG_2611 CNBG_2611 CNBG_3351 CNBG_3351 CNBG_3356 CNBG_3356 CNBG_3431 CNBG_3431 CNBG_3681 CNBG_3681 CNBG_3750 CNBG_3750 CNBG_4396 CNBG_4396
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_1733RNase_PH domain-containing protein. (332 aa)
CNBG_0078Pumilio domain-containing protein. (678 aa)
CNBG_0143Nuclease domain-containing protein 1. (945 aa)
CNBG_0213tRNA dimethylallyltransferase. (498 aa)
CNBG_0303PINc domain-containing protein. (506 aa)
CNBG_0110RRM_2 domain-containing protein. (579 aa)
CNBG_0465Exosome complex component RRP4. (331 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (122 aa)
CNBG_0978Histone deacetylase complex subunit. (309 aa)
CNBG_1090Exosome complex component RRP43. (321 aa)
CNBG_1265DNA topoisomerase 2-associated protein PAT1. (838 aa)
CNBG_1528Ribosomal protein L13. (163 aa)
CNBG_1723Decapping nuclease RAI1. (386 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (788 aa)
CNBG_0937Uncharacterized protein. (520 aa)
CNBG_2143Uncharacterized protein. (206 aa)
CNBG_1930CCR4-NOT transcription complex subunit 3. (755 aa)
CNBG_2258RNB domain-containing protein. (1538 aa)
CNBG_1337Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (414 aa)
CNBG_1352Mago-bind domain-containing protein. (183 aa)
CNBG_1372Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (595 aa)
CNBG_2290Nicotinamide N-methyltransferase. (284 aa)
CNBG_2320Smg4_UPF3 domain-containing protein. (434 aa)
CNBG_2395Glucose-repressible alcohol dehydrogenase transcriptional effector. (745 aa)
CNBG_2430Uncharacterized protein. (211 aa)
CNBG_2445Ubiquitin-protein ligase; Belongs to the cullin family. (811 aa)
CNBG_1692ATP-dependent RNA helicase DBP2-A; Belongs to the DEAD box helicase family. (539 aa)
CNBG_17475'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1095 aa)
CNBG_1922Ribonuclease III. (430 aa)
CNBG_3238Exosome complex component RRP45. (196 aa)
CNBG_3258Cell differentiation protein rcd1. (443 aa)
CNBG_2382DNA polymerase epsilon p12 subunit. (287 aa)
CNBG_3403Uncharacterized protein. (918 aa)
CNBG_3350Uncharacterized protein. (310 aa)
CNBG_2747Uncharacterized protein. (461 aa)
CNBG_4077SAP domain-containing protein. (512 aa)
CNBG_9147CCR4-NOT transcription complex subunit 4. (866 aa)
CNBG_06215Uncharacterized protein. (100 aa)
CNBG_9069Pol II transcription elongation factor. (893 aa)
CNBG_9025Uncharacterized protein. (1182 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (670 aa)
CNBG_5951RNase_PH domain-containing protein. (109 aa)
CNBG_5794NAD-dependent histone deacetylase SIR2. (586 aa)
CNBG_5749Uncharacterized protein. (343 aa)
CNBG_5851DNA-directed RNA polymerase II subunit RPB4. (153 aa)
CNBG_5131Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (442 aa)
CNBG_2907Antiviral helicase SKI2. (1277 aa)
CNBG_3757Cytoplasmic protein. (647 aa)
CNBG_3252Translation initiation factor 5. (402 aa)
CNBG_3332ATP-dependent helicase. (1022 aa)
CNBG_3899ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (615 aa)
CNBG_3487Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (210 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (142 aa)
CNBG_4668RNP domain-containing protein. (560 aa)
CNBG_4718Uncharacterized protein. (1232 aa)
CNBG_4525CCR4-NOT transcription complex subunit 7/8. (293 aa)
CNBG_4813RNA binding protein. (684 aa)
CNBG_5003Uncharacterized protein. (790 aa)
CNBG_4965Uncharacterized protein. (176 aa)
CNBG_4312Uncharacterized protein. (1049 aa)
CNBG_5373RNA polymerase II-associated factor 1. (440 aa)
CNBG_4502Nuclear cap-binding protein subunit 2. (226 aa)
CNBG_5483Elongation factor 1 alpha-like protein. (552 aa)
CNBG_4547DNA helicase. (955 aa)
CNBG_5425DNA helicase; Belongs to the MCM family. (708 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (135 aa)
CNBG_5751Histone H2A; Belongs to the histone H2A family. (138 aa)
CNBG_4932Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (199 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1181 aa)
CNBG_5097Scavenger mRNA-decapping enzyme DcpS. (270 aa)
CNBG_6133Nuclear cap-binding protein subunit 1. (911 aa)
CNBG_5985RNase_PH domain-containing protein. (299 aa)
CNBG_6025Exosome complex exonuclease DIS3/RRP44; Belongs to the RNR ribonuclease family. (1002 aa)
CNBG_6145FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (586 aa)
CNBG_5467Pumilio 2. (626 aa)
CNBG_5672Exosome complex component MTR3. (268 aa)
CNBG_5770U6 snRNA-associated Sm-like protein LSm7. (122 aa)
CNBG_5957Nucleolysin TIA-1/TIAR. (434 aa)
CNBG_5962Uncharacterized protein. (705 aa)
CNBG_0189Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (245 aa)
CNBG_0454DNA helicase; Belongs to the MCM family. (856 aa)
CNBG_0469Histone chaperone ASF1. (217 aa)
CNBG_0614Exosome complex component CSL4. (191 aa)
CNBG_0619Superkiller protein 3. (1498 aa)
CNBG_0709Exosome complex component RRP40. (247 aa)
CNBG_0924DNA-directed RNA polymerase II subunit RPB7. (172 aa)
CNBG_1719Translation elongation factor Tu. (754 aa)
CNBG_2044JmjC domain-containing protein. (390 aa)
CNBG_3059Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (642 aa)
CNBG_3464Pumilio-family RNA binding protein. (954 aa)
CNBG_3579CCR4-NOT transcription complex subunit 1. (2265 aa)
CNBG_3624Uncharacterized protein. (576 aa)
CNBG_3873Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (734 aa)
CNBG_5234Deacetylase sirtuin-type domain-containing protein. (287 aa)
CNBG_5319Uncharacterized protein. (868 aa)
CNBG_5574SET domain-containing protein. (449 aa)
CNBG_5679Uncharacterized protein. (553 aa)
CNBG_5709Uncharacterized protein. (321 aa)
CNBG_5734Arsenite-resistant protein ASR2. (954 aa)
CNBG_0231Deacetylase sirtuin-type domain-containing protein. (382 aa)
CNBG_0326CCHC-type domain-containing protein. (349 aa)
CNBG_0366Exosome complex protein LRP1. (205 aa)
CNBG_0441Compass component bre2. (618 aa)
CNBG_0451Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (415 aa)
CNBG_0826Smr domain-containing protein. (750 aa)
CNBG_1541RING-box protein 1b. (111 aa)
CNBG_1716Uncharacterized protein. (1128 aa)
CNBG_1746Signal recognition particle subunit SRP9. (142 aa)
CNBG_2046Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (947 aa)
CNBG_2151Uncharacterized protein. (194 aa)
CNBG_2286YTH domain family 2. (777 aa)
CNBG_2411DNA damage-binding protein 1. (1276 aa)
CNBG_2451NAD-dependent histone deacetylase SIR2. (326 aa)
CNBG_2611Ribonuclease P/MRP protein subunit POP1. (779 aa)
CNBG_3351Compass component swd1. (500 aa)
CNBG_3356Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (299 aa)
CNBG_3431Exosome complex exonuclease RRP6. (954 aa)
CNBG_3681Uncharacterized protein. (265 aa)
CNBG_3750mRNA-decapping enzyme subunit 2. (822 aa)
CNBG_4396Guanine nucleotide-binding protein subunit beta-like protein. (314 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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