STRINGSTRING
CNBG_6123 CNBG_6123 CNBG_0008 CNBG_0008 NOP7 NOP7 CNBG_0048 CNBG_0048 CNBG_0078 CNBG_0078 CNBG_0708 CNBG_0708 CNBG_0803 CNBG_0803 CNBG_0825 CNBG_0825 CNBG_1315 CNBG_1315 CNBG_1588 CNBG_1588 CNBG_1788 CNBG_1788 CNBG_2018 CNBG_2018 CNBG_0952 CNBG_0952 CNBG_1845 CNBG_1845 CNBG_2173 CNBG_2173 CNBG_1222 CNBG_1222 CNBG_2458 CNBG_2458 CNBG_2315 CNBG_2315 CNBG_2345 CNBG_2345 CNBG_2683 CNBG_2683 CNBG_2753 CNBG_2753 CNBG_2675 CNBG_2675 CNBG_2895 CNBG_2895 CNBG_2102 CNBG_2102 CNBG_2995 CNBG_2995 CNBG_2297 CNBG_2297 CNBG_3268 CNBG_3268 CNBG_3383 CNBG_3383 CNBG_2617 CNBG_2617 CNBG_3688 CNBG_3688 CNBG_4022 CNBG_4022 CNBG_4039 CNBG_4039 CNBG_4089 CNBG_4089 CNBG_4139 CNBG_4139 CNBG_3847 CNBG_3847 CNBG_3232 CNBG_3232 CNBG_3834 CNBG_3834 CNBG_4388 CNBG_4388 CNBG_3954 CNBG_3954 CNBG_4270 CNBG_4270 CNBG_4543 CNBG_4543 CNBG_4390 CNBG_4390 CNBG_4748 CNBG_4748 CNBG_4151 CNBG_4151 CNBG_4201 CNBG_4201 YTM1 YTM1 CNBG_5163 CNBG_5163 CNBG_4995 CNBG_4995 CNBG_5408 CNBG_5408 CNBG_5418 CNBG_5418 CNBG_5433 CNBG_5433 CNBG_5638 CNBG_5638 ERB1 ERB1 CNBG_5047 CNBG_5047 CNBG_5758 CNBG_5758 CNBG_5217 CNBG_5217 CNBG_6203 CNBG_6203 CNBG_5552 CNBG_5552 CNBG_5932 CNBG_5932 CNBG_6122 CNBG_6122 CNBG_6177 CNBG_6177 CNBG_0174 CNBG_0174 CNBG_0189 CNBG_0189 CNBG_0439 CNBG_0439 CNBG_0714 CNBG_0714 CNBG_0729 CNBG_0729 CNBG_1074 CNBG_1074 CNBG_1209 CNBG_1209 CNBG_1959 CNBG_1959 CNBG_2039 CNBG_2039 CNBG_2299 CNBG_2299 CNBG_3319 CNBG_3319 CNBG_3524 CNBG_3524 CNBG_3738 CNBG_3738 CNBG_4589 CNBG_4589 NAT10 NAT10 CNBG_5089 CNBG_5089 CNBG_5349 CNBG_5349 CNBG_5404 CNBG_5404 CNBG_6129 CNBG_6129 SPB1 SPB1 CNBG_0541 CNBG_0541 CNBG_1076 CNBG_1076 CNBG_1156 CNBG_1156 CNBG_1261 CNBG_1261 CNBG_1461 CNBG_1461 CNBG_2006 CNBG_2006 CNBG_2686 CNBG_2686 CNBG_3256 CNBG_3256 CNBG_4246 CNBG_4246 CNBG_4301 CNBG_4301 CNBG_4516 CNBG_4516 CNBG_4746 CNBG_4746 CNBG_4836 CNBG_4836 CNBG_5306 CNBG_5306 CNBG_9107 CNBG_9107 CNBG_9383 CNBG_9383 CNBG_9142 CNBG_9142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_6123Pre-60S factor REI1. (413 aa)
CNBG_0008U3 small nucleolar RNA-associated protein 5. (709 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (632 aa)
CNBG_0048NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17). (1077 aa)
CNBG_0078Pumilio domain-containing protein. (678 aa)
CNBG_0708ATP-dependent RNA helicase DRS1; Belongs to the DEAD box helicase family. (790 aa)
CNBG_0803rRNA-processing protein EBP2. (395 aa)
CNBG_0825Essential nuclear protein 1. (422 aa)
CNBG_1315WD repeat and SOF domain-containing protein 1. (457 aa)
CNBG_1588Nucleolar protein 58. (566 aa)
CNBG_1788Protein MAK16; Belongs to the MAK16 family. (343 aa)
CNBG_2018Ribosome biogenesis protein UTP30. (362 aa)
CNBG_0952Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4775 aa)
CNBG_1845CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. (338 aa)
CNBG_2173Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
CNBG_1222RNA-binding protein rnp24. (451 aa)
CNBG_2458Periodic tryptophan protein 2. (884 aa)
CNBG_2315rRNA biogenesis protein RRP36. (382 aa)
CNBG_234518S rRNA biogenesis protein RCL1. (365 aa)
CNBG_2683U3 small nucleolar RNA-associated protein 10. (2001 aa)
CNBG_2753Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (839 aa)
CNBG_2675Protein KRI1. (743 aa)
CNBG_2895ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (484 aa)
CNBG_2102Ribosomal RNA-processing protein 7. (404 aa)
CNBG_2995Uncharacterized protein. (454 aa)
CNBG_2297Protein LTV1. (373 aa)
CNBG_3268ATP-dependent RNA helicase DHX37/DHR1. (1287 aa)
CNBG_3383Nuclear GTP-binding protein. (639 aa)
CNBG_261740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (199 aa)
CNBG_3688Bud site selection protein 20. (140 aa)
CNBG_4022Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (271 aa)
CNBG_4039Pre-rRNA-processing protein TSR1. (807 aa)
CNBG_4089Ribosome biogenesis protein BRX1. (287 aa)
CNBG_4139rRNA biogenesis protein RRP5. (1486 aa)
CNBG_3847Ribosome biogenesis protein SSF1/2. (441 aa)
CNBG_3232Uncharacterized protein. (292 aa)
CNBG_3834Nuclear GTP-binding protein. (670 aa)
CNBG_4388Uncharacterized protein. (281 aa)
CNBG_3954Uncharacterized protein. (775 aa)
CNBG_4270BUD22 domain-containing protein. (520 aa)
CNBG_4543U3 small nucleolar RNA-associated protein 11. (316 aa)
CNBG_4390Nucleolar complex protein 2. (748 aa)
CNBG_4748U3 small nucleolar RNA-associated protein 23. (293 aa)
CNBG_4151U3 small nucleolar ribonucleoprotein IMP4. (288 aa)
CNBG_4201ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family. (603 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (486 aa)
CNBG_5163Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (315 aa)
CNBG_4995Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (666 aa)
CNBG_540860S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (181 aa)
CNBG_5418Ribosome biogenesis protein ENP2. (771 aa)
CNBG_5433U3 small nucleolar RNA-associated protein 6. (447 aa)
CNBG_5638Ribosomal RNA-processing protein 9. (546 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (838 aa)
CNBG_5047rRNA-processing protein EFG1. (287 aa)
CNBG_5758U3 small nucleolar ribonucleoprotein LCP5. (382 aa)
CNBG_5217Uncharacterized protein. (174 aa)
CNBG_6203U3 small nucleolar RNA-associated protein 14. (952 aa)
CNBG_5552Uncharacterized protein. (592 aa)
CNBG_5932KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (403 aa)
CNBG_6122ATP-dependent RNA helicase DBP10. (798 aa)
CNBG_6177U3 small nucleolar RNA-associated protein 18. (624 aa)
CNBG_0174Uncharacterized protein. (769 aa)
CNBG_0189Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (245 aa)
CNBG_043940S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (252 aa)
CNBG_0714U3 small nucleolar RNA-associated protein 22. (1237 aa)
CNBG_0729U3 small nucleolar RNA-associated protein 21. (597 aa)
CNBG_1074rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (325 aa)
CNBG_1209Ribosome biogenesis ATPase. (763 aa)
CNBG_195940S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (256 aa)
CNBG_2039Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (366 aa)
CNBG_2299Ribosomal RNA-processing protein 1. (353 aa)
CNBG_3319Ribosome production factor 1. (429 aa)
CNBG_3524Uncharacterized protein. (474 aa)
CNBG_3738rRNA 2'-O-methyltransferase fibrillarin. (314 aa)
CNBG_4589U3 small nucleolar RNA-associated protein 12. (988 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (724 aa)
CNBG_5089U3 small nucleolar RNA-associated protein 3. (715 aa)
CNBG_5349Nucleolar protein 56. (571 aa)
CNBG_5404U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (776 aa)
CNBG_6129U3 small nucleolar RNA-associated protein 7. (624 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (908 aa)
CNBG_0541Uncharacterized protein. (521 aa)
CNBG_1076U3 small nucleolar ribonucleoprotein IMP3. (182 aa)
CNBG_1156U3 small nucleolar RNA-associated protein 15. (523 aa)
CNBG_1261Rsa3 domain-containing protein. (199 aa)
CNBG_146120S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (493 aa)
CNBG_2006U3 small nucleolar RNA-associated protein 19. (420 aa)
CNBG_2686Ribosome biogenesis protein MAK21. (1122 aa)
CNBG_3256Ribosome biogenesis protein BMS1. (1139 aa)
CNBG_4246RNA helicase. (724 aa)
CNBG_4301U3 small nucleolar RNA-associated protein 20. (2586 aa)
CNBG_4516FHA domain-containing protein. (799 aa)
CNBG_4746Uncharacterized protein. (582 aa)
CNBG_4836Ribosome biogenesis protein NSA2. (254 aa)
CNBG_5306U3 small nucleolar RNA-associated protein 24. (181 aa)
CNBG_9107ATP-dependent RNA helicase DBP4; Belongs to the DEAD box helicase family. (851 aa)
CNBG_9383U3 small nucleolar RNA-associated protein 13. (903 aa)
CNBG_9142Nucleolar protein 14. (932 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.