(31 nodes) 90S preribosome network (Cryptococcus gattii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (632 aa)
	CNBG_4151	U3 small nucleolar ribonucleoprotein IMP4. (288 aa)
	CNBG_4390	Nucleolar complex protein 2. (748 aa)
	CNBG_4270	BUD22 domain-containing protein. (520 aa)
	CNBG_4022	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (271 aa)
	CNBG_5433	U3 small nucleolar RNA-associated protein 6. (447 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (838 aa)
	CNBG_5552	Uncharacterized protein. (592 aa)
	CNBG_6177	U3 small nucleolar RNA-associated protein 18. (624 aa)
	CNBG_0714	U3 small nucleolar RNA-associated protein 22. (1237 aa)
	CNBG_0729	U3 small nucleolar RNA-associated protein 21. (597 aa)
	CNBG_2039	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (366 aa)
	CNBG_4589	U3 small nucleolar RNA-associated protein 12. (988 aa)
	CNBG_5404	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (776 aa)
	CNBG_1076	U3 small nucleolar ribonucleoprotein IMP3. (182 aa)
	CNBG_2006	U3 small nucleolar RNA-associated protein 19. (420 aa)
	CNBG_2686	Ribosome biogenesis protein MAK21. (1122 aa)
	CNBG_2995	Uncharacterized protein. (454 aa)
	CNBG_2102	Ribosomal RNA-processing protein 7. (404 aa)
	CNBG_2675	Protein KRI1. (743 aa)
	CNBG_2683	U3 small nucleolar RNA-associated protein 10. (2001 aa)
	CNBG_2345	18S rRNA biogenesis protein RCL1. (365 aa)
	CNBG_2315	rRNA biogenesis protein RRP36. (382 aa)
	CNBG_3256	Ribosome biogenesis protein BMS1. (1139 aa)
	CNBG_4246	RNA helicase. (724 aa)
	CNBG_4301	U3 small nucleolar RNA-associated protein 20. (2586 aa)
	CNBG_4746	Uncharacterized protein. (582 aa)
	CNBG_9383	U3 small nucleolar RNA-associated protein 13. (903 aa)
	CNBG_9142	Nucleolar protein 14. (932 aa)
	CNBG_1845	CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. (338 aa)
	CNBG_2458	Periodic tryptophan protein 2. (884 aa)

Your Current Organism:

Cryptococcus gattii

NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNBG_0714	CNBG_0729	A0A095D039	A0A095D057	U3 small nucleolar RNA-associated protein 22.	U3 small nucleolar RNA-associated protein 21.	0.999
CNBG_0714	CNBG_1076	A0A095D039	A0A095ECM3	U3 small nucleolar RNA-associated protein 22.	U3 small nucleolar ribonucleoprotein IMP3.	0.994
CNBG_0714	CNBG_1845	A0A095D039	A0A095C632	U3 small nucleolar RNA-associated protein 22.	CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily.	0.908
CNBG_0714	CNBG_2006	A0A095D039	A0A095EFK7	U3 small nucleolar RNA-associated protein 22.	U3 small nucleolar RNA-associated protein 19.	0.997
CNBG_0714	CNBG_2039	A0A095D039	A0A095D4J7	U3 small nucleolar RNA-associated protein 22.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.979
CNBG_0714	CNBG_2102	A0A095D039	A0A095C9C2	U3 small nucleolar RNA-associated protein 22.	Ribosomal RNA-processing protein 7.	0.999
CNBG_0714	CNBG_2315	A0A095D039	A0A095C7H5	U3 small nucleolar RNA-associated protein 22.	rRNA biogenesis protein RRP36.	0.983
CNBG_0714	CNBG_2345	A0A095D039	A0A095C7L5	U3 small nucleolar RNA-associated protein 22.	18S rRNA biogenesis protein RCL1.	0.993
CNBG_0714	CNBG_2458	A0A095D039	A0A095C7H2	U3 small nucleolar RNA-associated protein 22.	Periodic tryptophan protein 2.	0.999
CNBG_0714	CNBG_2675	A0A095D039	A0A095C8L3	U3 small nucleolar RNA-associated protein 22.	Protein KRI1.	0.400
CNBG_0714	CNBG_2683	A0A095D039	A0A095C834	U3 small nucleolar RNA-associated protein 22.	U3 small nucleolar RNA-associated protein 10.	0.999
CNBG_0714	CNBG_2686	A0A095D039	A0A095EHQ0	U3 small nucleolar RNA-associated protein 22.	Ribosome biogenesis protein MAK21.	0.854
CNBG_0714	CNBG_2995	A0A095D039	A0A095C9P3	U3 small nucleolar RNA-associated protein 22.	Uncharacterized protein.	0.400
CNBG_0714	CNBG_3256	A0A095D039	A0A095EJM0	U3 small nucleolar RNA-associated protein 22.	Ribosome biogenesis protein BMS1.	0.998
CNBG_0714	CNBG_4022	A0A095D039	A0A095CBN1	U3 small nucleolar RNA-associated protein 22.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.930
CNBG_0714	CNBG_4151	A0A095D039	A0A095CF58	U3 small nucleolar RNA-associated protein 22.	U3 small nucleolar ribonucleoprotein IMP4.	0.998
CNBG_0714	CNBG_4246	A0A095D039	A0A095EMV3	U3 small nucleolar RNA-associated protein 22.	RNA helicase.	0.702
CNBG_0714	CNBG_4301	A0A095D039	A0A095EN35	U3 small nucleolar RNA-associated protein 22.	U3 small nucleolar RNA-associated protein 20.	0.998
CNBG_0714	CNBG_4390	A0A095D039	A0A095CE90	U3 small nucleolar RNA-associated protein 22.	Nucleolar complex protein 2.	0.950
CNBG_0714	CNBG_4589	A0A095D039	A0A095DD16	U3 small nucleolar RNA-associated protein 22.	U3 small nucleolar RNA-associated protein 12.	0.998

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