STRINGSTRING
CNBG_1314 CNBG_1314 CNBG_9246 CNBG_9246 CNBG_9215 CNBG_9215 CNBG_1681 CNBG_1681 NTH1 NTH1 CNBG_0244 CNBG_0244 CNBG_4340 CNBG_4340 CNBG_1348 CNBG_1348
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_1314DNA excision repair protein ERCC-3. (866 aa)
CNBG_9246Uncharacterized protein. (103 aa)
CNBG_9215DNA repair protein. (319 aa)
CNBG_1681DNA excision repair protein ERCC-1. (315 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (452 aa)
CNBG_0244DNA excision repair protein ERCC-5. (752 aa)
CNBG_4340DNA excision repair protein ERCC-4. (1084 aa)
CNBG_1348DNA excision repair protein ERCC-2. (799 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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