STRINGSTRING
CNBG_2612 CNBG_2612 CNBG_0445 CNBG_0445 CNBG_1210 CNBG_1210 CNBG_2070 CNBG_2070 CNBG_3568 CNBG_3568 CNBG_3842 CNBG_3842 CNBG_3864 CNBG_3864 CNBG_4528 CNBG_4528 CNBG_5240 CNBG_5240 CNBG_5518 CNBG_5518 CNBG_5893 CNBG_5893 CNBG_5751 CNBG_5751 CNBG_5172 CNBG_5172 CNBG_6145 CNBG_6145 CNBG_6127 CNBG_6127 CNBG_0469 CNBG_0469 CNBG_0904 CNBG_0904 CNBG_1004 CNBG_1004 CNBG_2876 CNBG_2876 CNBG_3797 CNBG_3797 CNBG_9069 CNBG_9069 CNBG_5401 CNBG_5401
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_2612Chromodomain-helicase-DNA-binding protein 1. (1504 aa)
CNBG_0445RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (484 aa)
CNBG_1210Chromatin assembly factor 1 subunit B. (820 aa)
CNBG_2070Zinc finger HIT domain-containing protein 1. (157 aa)
CNBG_3568Histone H1/5. (192 aa)
CNBG_3842Template-activating factor I; Belongs to the nucleosome assembly protein (NAP) family. (252 aa)
CNBG_3864Uncharacterized protein. (847 aa)
CNBG_4528Helicase SWR1. (1619 aa)
CNBG_5240Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family. (416 aa)
CNBG_5518Transcription elongation factor SPT6. (1506 aa)
CNBG_5893YL1_C domain-containing protein. (592 aa)
CNBG_5751Histone H2A; Belongs to the histone H2A family. (138 aa)
CNBG_5172SWR1-complex protein 4. (463 aa)
CNBG_6145FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (586 aa)
CNBG_6127Histone H2B; Belongs to the histone H2B family. (139 aa)
CNBG_0469Histone chaperone ASF1. (217 aa)
CNBG_0904ATPase. (1556 aa)
CNBG_1004Actin-like protein ARP6; Belongs to the actin family. (490 aa)
CNBG_2876Histone H1/5. (193 aa)
CNBG_3797Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CNBG_9069Pol II transcription elongation factor. (893 aa)
CNBG_5401HAT1-interacting factor 1. (401 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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