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CNBG_3780 CNBG_3780 CNBG_0770 CNBG_0770 LSM8 LSM8 CNBG_1858 CNBG_1858 CNBG_2173 CNBG_2173 CNBG_1532 CNBG_1532 CNBG_2863 CNBG_2863 CNBG_2888 CNBG_2888 CNBG_3373 CNBG_3373 CNBG_4700 CNBG_4700 CNBG_5673 CNBG_5673 LSM3 LSM3 CNBG_2329 CNBG_2329 CNBG_5837 CNBG_5837 CNBG_5411 CNBG_5411 CNBG_9560 CNBG_9560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_3780U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
CNBG_0770Pre-mRNA-splicing factor 38A. (269 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
CNBG_1858Pre-mRNA-splicing factor ini1. (116 aa)
CNBG_2173Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
CNBG_1532Small nuclear ribonucleoprotein Sm D2. (111 aa)
CNBG_2863RRM domain-containing protein. (190 aa)
CNBG_2888Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
CNBG_3373Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
CNBG_4700Pre-mRNA branch site protein p14. (120 aa)
CNBG_5673Small nuclear ribonucleoprotein B and B. (197 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
CNBG_2329Splicing factor 3B subunit 2. (574 aa)
CNBG_5837Small nuclear ribonucleoprotein G. (78 aa)
CNBG_5411U4/U6 small nuclear ribonucleoprotein PRP31. (553 aa)
CNBG_9560Uncharacterized protein. (324 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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