STRINGSTRING
CNBG_1141 CNBG_1141 CNBG_2681 CNBG_2681 CNBG_3810 CNBG_3810 CNBG_5851 CNBG_5851 CNBG_9165 CNBG_9165 CNBG_9246 CNBG_9246 CNBG_9115 CNBG_9115 CNBG_9065 CNBG_9065 CNBG_0016 CNBG_0016 CNBG_5174 CNBG_5174 CNBG_5064 CNBG_5064 CNBG_3349 CNBG_3349 CNBG_2764 CNBG_2764 CNBG_1314 CNBG_1314 CNBG_0924 CNBG_0924 CNBG_6115 CNBG_6115 CNBG_4587 CNBG_4587 CNBG_5310 CNBG_5310 CNBG_5015 CNBG_5015 CNBG_4745 CNBG_4745 CNBG_3657 CNBG_3657 CNBG_2645 CNBG_2645 CNBG_2668 CNBG_2668 CNBG_1287 CNBG_1287 CNBG_1348 CNBG_1348 CNBG_0133 CNBG_0133
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNBG_1141DNA-directed RNA polymerase I, II, and III subunit RPABC1. (210 aa)
CNBG_2681DNA-directed RNA polymerase I, II, and III subunit RPABC2. (149 aa)
CNBG_3810mRNA cap guanine-N7 methyltransferase. (133 aa)
CNBG_5851DNA-directed RNA polymerase II subunit RPB4. (153 aa)
CNBG_9165CDK-activating kinase assembly factor MAT1. (373 aa)
CNBG_9246Uncharacterized protein. (103 aa)
CNBG_9115TFIIH basal transcription factor complex TTD-A subunit. (78 aa)
CNBG_9065DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1187 aa)
CNBG_0016mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (423 aa)
CNBG_5174DNA-directed RNA polymerase II subunit RPB3. (377 aa)
CNBG_5064RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (442 aa)
CNBG_3349Transcription initiation factor TFIIH subunit 1. (641 aa)
CNBG_2764DNA-directed RNA polymerase I, II, and III subunit RPABC3. (163 aa)
CNBG_1314DNA excision repair protein ERCC-3. (866 aa)
CNBG_0924DNA-directed RNA polymerase II subunit RPB7. (172 aa)
CNBG_6115DNA-directed RNA polymerase I, II, and III subunit rpabc5. (69 aa)
CNBG_4587Transcription initiation factor TFIIF subunit beta. (334 aa)
CNBG_5310DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
CNBG_5015CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (358 aa)
CNBG_4745Transcription initiation factor TFIIH subunit 3. (370 aa)
CNBG_3657Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (765 aa)
CNBG_2645Cyclin H; Belongs to the cyclin family. (447 aa)
CNBG_2668General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (438 aa)
CNBG_1287Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1152 aa)
CNBG_1348DNA excision repair protein ERCC-2. (799 aa)
CNBG_0133DNA-directed RNA polymerase II subunit RPB11. (162 aa)
Your Current Organism:
Cryptococcus gattii
NCBI taxonomy Id: 294750
Other names: C. gattii VGII R265, Cryptococcus bacillisporus R265, Cryptococcus bacillisporus VGII R265, Cryptococcus deuterogattii R265, Cryptococcus gattii R265, Cryptococcus gattii VGII R265, Cryptococcus neoformans R265
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