STRINGSTRING
yfjD yfjD ypjD ypjD ratA ratA ratB ratB sspA sspA sspB sspB CNG68431.1 CNG68431.1 yqiC yqiC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yfjDHemolysins and related proteins containing CBS domains. (427 aa)
ypjDCcsa-related protein. (263 aa)
ratAPutative oligoketide cyclase/lipid transport protein. (144 aa)
ratBUncharacterised protein family (UPF0125); Belongs to the UPF0125 (RnfH) family. (94 aa)
sspAStringent starvation protein A; Belongs to the GST superfamily. (213 aa)
sspBClpXP protease specificity-enhancing factor. (171 aa)
CNG68431.1Sam-dependent methyltransferase. (239 aa)
yqiCProtein yqiC. (102 aa)
Your Current Organism:
Yersinia frederiksenii
NCBI taxonomy Id: 29484
Other names: ATCC 33641, CCUG 11293, CIP 80.29, DSM 18490, NCTC 11470, Y. frederiksenii, strain 6175
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.