STRINGSTRING
glk glk tkt tkt pgi pgi tal tal pgm pgm yeaD yeaD malX malX ptsG ptsG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glkGlk: glucokinase; Belongs to the bacterial glucokinase family. (323 aa)
tktTransketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (664 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (548 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (317 aa)
pgmPgm: phosphoglucomutase, alpha-D-glucose phosphate-specific. (547 aa)
yeaDAldose 1-epimerase family protein; Belongs to the glucose-6-phosphate 1-epimerase family. (291 aa)
malXpts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component domain protein. (536 aa)
ptsGPTS system glucose-specific EIICB component. (477 aa)
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
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