STRINGSTRING
envZ envZ ompR ompR cpxA cpxA cpxR cpxR arcA_2 arcA_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
envZHAMP domain protein. (453 aa)
ompRTranscriptional regulatory protein ompR. (239 aa)
cpxASensor protein CpxA. (458 aa)
cpxRTranscriptional regulatory protein CpxR. (232 aa)
arcA_2Hypothetical protein; Transcriptional regulatory, C terminal family protein. (238 aa)
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
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